RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
ITGB1-210ENST00000474568 USP17L2Q6R6M4 530 aa19.16■□□□□ 0.66
ITGB1-210ENST00000474568 C16orf86Q6ZW13 317 aa19.16■□□□□ 0.66
ITGB1-210ENST00000474568 ANKRD13CQ8N6S4 541 aa19.16■□□□□ 0.66
ITGB1-210ENST00000474568 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
ITGB1-210ENST00000474568 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
ITGB1-210ENST00000474568 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
ITGB1-210ENST00000474568 FAM227BQ96M60 508 aa19.15■□□□□ 0.66
ITGB1-210ENST00000474568 PTCH2Q9Y6C5 1203 aa19.15■□□□□ 0.66
ITGB1-210ENST00000474568 PTPRFP10586 1907 aa19.15■□□□□ 0.66
ITGB1-210ENST00000474568 ZSWIM8A7E2V4 1837 aa19.14■□□□□ 0.65
ITGB1-210ENST00000474568 BAZ2AQ9UIF9 1905 aaKnown RBP19.14■□□□□ 0.65
ITGB1-210ENST00000474568 PEX10O60683 326 aa19.14■□□□□ 0.65
ITGB1-210ENST00000474568 SBK1Q52WX2 424 aa19.14■□□□□ 0.65
ITGB1-210ENST00000474568 GIMAP6Q6P9H5 292 aa19.14■□□□□ 0.65
ITGB1-210ENST00000474568 TMEM179Q6ZVK1 233 aa19.14■□□□□ 0.65
ITGB1-210ENST00000474568 P2RX7Q99572 595 aaKnown RBP19.14■□□□□ 0.65
ITGB1-210ENST00000474568 A0A0D9SFI3 127 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 A0A1W2PRG0 241 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 PDE4AP27815 886 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 NMIQ13287 307 aaPredicted RBP19.13■□□□□ 0.65
ITGB1-210ENST00000474568 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 NAPBQ9H115 298 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
ITGB1-210ENST00000474568 LOC285556D6RIA3 1793 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 PRDM1O75626 825 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 USP14P54578 494 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 FCGRTP55899 365 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 ICA1Q05084 483 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 VPS53Q5VIR6 699 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 KIAA1683Q9H0B3 1180 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 OSBPL3Q9H4L5 887 aa19.12■□□□□ 0.65
ITGB1-210ENST00000474568 MYCP01106 439 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-210ENST00000474568 VCAM1P19320 739 aa19.11■□□□□ 0.65
ITGB1-210ENST00000474568 HOXA7P31268 230 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-210ENST00000474568 HERVK_113P62684 666 aa19.11■□□□□ 0.65
ITGB1-210ENST00000474568 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
ITGB1-210ENST00000474568 CCDC17Q96LX7 622 aa19.11■□□□□ 0.65
ITGB1-210ENST00000474568 HELLSQ9NRZ9 838 aa19.11■□□□□ 0.65
ITGB1-210ENST00000474568 MYPNQ86TC9 1320 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 FOXP2O15409 715 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 RASA1P20936 1047 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 GCLCP48506 637 aaPredicted RBP19.1■□□□□ 0.65
ITGB1-210ENST00000474568 PRKCZQ05513 592 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 FAM110CQ1W6H9 321 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 SIAH1Q8IUQ4 282 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 SH3TC2Q8TF17 1288 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 PAGR1Q9BTK6 254 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 RPAP3Q9H6T3 665 aaPredicted RBP19.1■□□□□ 0.65
ITGB1-210ENST00000474568 ARHGEF10LQ9HCE6 1279 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 SRRDQ9UH36 339 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 GABRQQ9UN88 632 aa19.1■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 TNPO2O14787 897 aaKnown RBP19.09■□□□□ 0.65
ITGB1-210ENST00000474568 RAD21O60216 631 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 SDSP20132 328 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 HOXD10P28358 340 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 SLC9C1Q4G0N8 1177 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 MCMDC2Q4G0Z9 681 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 KIAA1755Q5JYT7 1200 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 ZNF589Q86UQ0 364 aaPredicted RBP19.09■□□□□ 0.65
ITGB1-210ENST00000474568 SPICE1Q8N0Z3 855 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 RAET1EQ8TD07 263 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
ITGB1-210ENST00000474568 ROBO3Q96MS0 1386 aa19.08■□□□□ 0.65
ITGB1-210ENST00000474568 GNRH1P01148 92 aa19.08■□□□□ 0.64
ITGB1-210ENST00000474568 EEF2P13639 858 aaKnown RBP19.08■□□□□ 0.64
ITGB1-210ENST00000474568 CTDSPL2Q05D32 466 aa19.08■□□□□ 0.64
ITGB1-210ENST00000474568 PPARAQ07869 468 aa19.08■□□□□ 0.64
ITGB1-210ENST00000474568 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
ITGB1-210ENST00000474568 CATSPERGQ6ZRH7 1159 aa19.08■□□□□ 0.64
ITGB1-210ENST00000474568 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.08■□□□□ 0.64
ITGB1-210ENST00000474568 ZNF444Q8N0Y2 327 aaPredicted RBP19.07■□□□□ 0.64
ITGB1-210ENST00000474568 TANGO6Q9C0B7 1094 aa19.07■□□□□ 0.64
ITGB1-210ENST00000474568 KANSL2Q9H9L4 492 aa19.07■□□□□ 0.64
ITGB1-210ENST00000474568 RBPJLQ9UBG7 517 aa19.07■□□□□ 0.64
ITGB1-210ENST00000474568 PRMT2P55345 433 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 POTEEQ6S8J3 1075 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
ITGB1-210ENST00000474568 ARMC5Q96C12 935 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 INCENPQ9NQS7 918 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 MORF4L1Q9UBU8 362 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 TMX2Q9Y320 296 aa19.06■□□□□ 0.64
ITGB1-210ENST00000474568 HTTP42858 3142 aa19.05■□□□□ 0.64
ITGB1-210ENST00000474568 CCDC171Q6TFL3 1326 aa19.05■□□□□ 0.64
ITGB1-210ENST00000474568 SLC3A2P08195 630 aaKnown RBP19.05■□□□□ 0.64
ITGB1-210ENST00000474568 GSPT1P15170 499 aaKnown RBP19.05■□□□□ 0.64
ITGB1-210ENST00000474568 FLT3LGP49771 235 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms