RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 C19orf81C9J6K1 198 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 TLR2O60603 784 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 CDK8P49336 464 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 HMGCS2P54868 508 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 BACE1P56817 501 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 SP3Q02447 781 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
RNF220-210ENST00000474394 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 CCDC17Q96LX7 622 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 SLC45A1Q9Y2W3 748 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 PTPRFP10586 1907 aa12.87□□□□□ -0.35
RNF220-210ENST00000474394 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
RNF220-210ENST00000474394 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
RNF220-210ENST00000474394 PDE4AP27815 886 aa12.86□□□□□ -0.35
RNF220-210ENST00000474394 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNF220-210ENST00000474394 MTMR2Q13614 643 aa12.86□□□□□ -0.35
RNF220-210ENST00000474394 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
RNF220-210ENST00000474394 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
RNF220-210ENST00000474394 SDSP20132 328 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 TMEM179Q6ZVK1 233 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 DPF3Q92784 378 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 FAM227BQ96M60 508 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 FEZ1Q99689 392 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 NAPBQ9H115 298 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
RNF220-210ENST00000474394 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 HIP1O00291 1037 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 CYP2C8P10632 490 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 OSBPP22059 807 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 USP14P54578 494 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 MFAP1P55081 439 aaKnown RBP12.84□□□□□ -0.35
RNF220-210ENST00000474394 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
RNF220-210ENST00000474394 KIF22Q14807 665 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 SEPT2Q15019 361 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 C17orf99Q6UX52 265 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
RNF220-210ENST00000474394 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 DIAPH3Q9NSV4 1193 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 ADGRA2Q96PE1 1338 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 MYH8P13535 1937 aa12.84□□□□□ -0.35
RNF220-210ENST00000474394 ROBO3Q96MS0 1386 aa12.83□□□□□ -0.36
RNF220-210ENST00000474394 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
RNF220-210ENST00000474394 AKR1B1P15121 316 aa12.83□□□□□ -0.36
RNF220-210ENST00000474394 CENPQQ7L2Z9 268 aaPredicted RBP12.83□□□□□ -0.36
RNF220-210ENST00000474394 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
RNF220-210ENST00000474394 PRO3102Q9H379 93 aa12.83□□□□□ -0.36
RNF220-210ENST00000474394 LOC285556D6RIA3 1793 aa12.83□□□□□ -0.36
RNF220-210ENST00000474394 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
RNF220-210ENST00000474394 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
RNF220-210ENST00000474394 ICA1Q05084 483 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 PPARAQ07869 468 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 ALX1Q15699 326 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
RNF220-210ENST00000474394 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 C12orf42Q96LP6 360 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
RNF220-210ENST00000474394 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
RNF220-210ENST00000474394 FOXP2O15409 715 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 BCRP11274 1271 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 GSPT1P15170 499 aaKnown RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 RASA1P20936 1047 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 CAP1Q01518 475 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 PDE4BQ07343 736 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
RNF220-210ENST00000474394 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
RNF220-210ENST00000474394 MYCP01106 439 aaPredicted RBP12.8□□□□□ -0.36
RNF220-210ENST00000474394 GNRH1P01148 92 aa12.8□□□□□ -0.36
RNF220-210ENST00000474394 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
RNF220-210ENST00000474394 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
RNF220-210ENST00000474394 PTCH2Q9Y6C5 1203 aa12.8□□□□□ -0.36
RNF220-210ENST00000474394 VCANP13611 3396 aa12.79□□□□□ -0.36
RNF220-210ENST00000474394 A0A1W2PPC1 479 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms