RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ZYXQ15942 572 aaKnown RBP27.06■■□□□ 1.92
PTP4A1-203ENST00000473334 CTR9Q6PD62 1173 aa27.06■■□□□ 1.92
PTP4A1-203ENST00000473334 ARPP21Q9UBL0 812 aaPredicted RBP27.06■■□□□ 1.92
PTP4A1-203ENST00000473334 GPAA1O43292 621 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 GIMAP6Q6P9H5 292 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 TMEM179Q6ZVK1 233 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 C16orf86Q6ZW13 317 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 RAET1EQ8TD07 263 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 ACER1Q8TDN7 264 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 STAP2Q9UGK3 403 aa27.05■■□□□ 1.92
PTP4A1-203ENST00000473334 GSG1L2A8MUP6 293 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 M0R2C6 588 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 GNAT2P19087 354 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 PRKCZQ05513 592 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 SMC5Q8IY18 1101 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 SH3TC2Q8TF17 1288 aa27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 P2RX7Q99572 595 aaKnown RBP27.04■■□□□ 1.92
PTP4A1-203ENST00000473334 TNRC18O15417 2968 aaPredicted RBP27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 SMIM22K7EJ46 135 aa27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 TNPO2O14787 897 aaKnown RBP27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 CDK8P49336 464 aa27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 PDE1AP54750 535 aa27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 HERVK_113P62684 666 aa27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 MORF4L1Q9UBU8 362 aa27.03■■□□□ 1.92
PTP4A1-203ENST00000473334 SBK1Q52WX2 424 aa27.02■■□□□ 1.92
PTP4A1-203ENST00000473334 CCDC17Q96LX7 622 aa27.02■■□□□ 1.92
PTP4A1-203ENST00000473334 LNPKQ9C0E8 428 aa27.02■■□□□ 1.92
PTP4A1-203ENST00000473334 GABRQQ9UN88 632 aa27.02■■□□□ 1.92
PTP4A1-203ENST00000473334 POTEFA5A3E0 1075 aa27.01■■□□□ 1.91
PTP4A1-203ENST00000473334 AKR1B1P15121 316 aa27.01■■□□□ 1.91
PTP4A1-203ENST00000473334 GRK4P32298 578 aa27.01■■□□□ 1.91
PTP4A1-203ENST00000473334 GTF3C2Q8WUA4 911 aaPredicted RBP27.01■■□□□ 1.91
PTP4A1-203ENST00000473334 COA7Q96BR5 231 aa27.01■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L15C9J2P7 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L13C9JLJ4 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L11C9JVI0 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L18D6R9N7 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L22D6RA61 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L17D6RBQ6 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L19D6RCP7 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L20D6RJB6 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 IGHDP01880 384 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 VCAM1P19320 739 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 USP17L24Q0WX57 530 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 ZMYM1Q5SVZ6 1142 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 TMEM106CQ9BVX2 250 aa27■■□□□ 1.91
PTP4A1-203ENST00000473334 EPB41L4AQ9HCS5 686 aaPredicted RBP27■■□□□ 1.91
PTP4A1-203ENST00000473334 DOCK3Q8IZD9 2030 aa26.99■■□□□ 1.91
PTP4A1-203ENST00000473334 A0A1W2PRG0 241 aa26.99■■□□□ 1.91
PTP4A1-203ENST00000473334 EVI5LQ96CN4 794 aa26.99■■□□□ 1.91
PTP4A1-203ENST00000473334 SEC62Q99442 399 aaKnown RBP26.99■■□□□ 1.91
PTP4A1-203ENST00000473334 ROBO3Q96MS0 1386 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 PATL2C9JE40 543 aaKnown RBP26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 TDO2P48775 406 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 FLT3LGP49771 235 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 ICA1Q05084 483 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 B4GALNT3Q6L9W6 998 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 CATSPERGQ6ZRH7 1159 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 SLAIN1Q8ND83 568 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 ARHGEF10LQ9HCE6 1279 aa26.98■■□□□ 1.91
PTP4A1-203ENST00000473334 KIAA0100Q14667 2235 aaKnown RBP26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 MINDY4BA8MYZ0 360 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 APPP05067 770 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 IRF5Q13568 498 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 GPRC5AQ8NFJ5 357 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 TXNRD2Q9NNW7 524 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 RBPJLQ9UBG7 517 aa26.97■■□□□ 1.91
PTP4A1-203ENST00000473334 BRCA2P51587 3418 aa26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 MYCP01106 439 aaPredicted RBP26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 CHD1LQ86WJ1 897 aa26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 CLEC10AQ8IUN9 316 aa26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 RPAP3Q9H6T3 665 aaPredicted RBP26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 SH2D4AQ9H788 454 aa26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 GREB1LQ9C091 1923 aaPredicted RBP26.96■■□□□ 1.91
PTP4A1-203ENST00000473334 ADCY3O60266 1144 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 ERVK-9P63128 1117 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 ERVK-24P63145 666 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 NUCB1Q02818 461 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 IFNL3Q8IZI9 196 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 PAGR1Q9BTK6 254 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 NACAP1Q9BZK3 213 aa26.95■■□□□ 1.9
PTP4A1-203ENST00000473334 PEX10O60683 326 aa26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 UBXN2AP68543 259 aa26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 SIAH1Q8IUQ4 282 aa26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 PXYLP1Q8TE99 480 aa26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 BIN2Q9UBW5 565 aaPredicted RBP26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 TMX2Q9Y320 296 aa26.94■■□□□ 1.9
PTP4A1-203ENST00000473334 PLXNB2O15031 1838 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 EN2P19622 333 aaPredicted RBP26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 MTFR1Q15390 333 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 POTEEQ6S8J3 1075 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 STK11IPQ8N1F8 1099 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 LPAR1Q92633 364 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 KANSL2Q9H9L4 492 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 MKNK2Q9HBH9 465 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 RABGAP1Q9Y3P9 1069 aa26.93■■□□□ 1.9
PTP4A1-203ENST00000473334 RASA1P20936 1047 aa26.92■■□□□ 1.9
PTP4A1-203ENST00000473334 LBX2Q6XYB7 198 aa26.92■■□□□ 1.9
PTP4A1-203ENST00000473334 TICAM2Q86XR7 235 aa26.92■■□□□ 1.9
PTP4A1-203ENST00000473334 NAPBQ9H115 298 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms