RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 PTPN22Q9Y2R2 807 aa10.96□□□□□ -0.65
C1orf56-203ENST00000473308 MYH8P13535 1937 aa10.96□□□□□ -0.66
C1orf56-203ENST00000473308 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 A0A0D9SFI3 127 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 A0A1W2PRG0 241 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 MINDY4BA8MYZ0 360 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 FOXP2O15409 715 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 APPP05067 770 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 OSBPP22059 807 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
C1orf56-203ENST00000473308 KIF22Q14807 665 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 ARHGEF6Q15052 776 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 TMEM179Q6ZVK1 233 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 SMCR8Q8TEV9 937 aaPredicted RBP10.95□□□□□ -0.66
C1orf56-203ENST00000473308 RILPL2Q969X0 211 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 CCDC17Q96LX7 622 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 FAM227BQ96M60 508 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 FEZ1Q99689 392 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 KIAA1683Q9H0B3 1180 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
C1orf56-203ENST00000473308 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
C1orf56-203ENST00000473308 RASA1P20936 1047 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 PSMC4P43686 418 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 USP14P54578 494 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
C1orf56-203ENST00000473308 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
C1orf56-203ENST00000473308 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
C1orf56-203ENST00000473308 MCMDC2Q4G0Z9 681 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 VPS53Q5VIR6 699 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 CLEC10AQ8IUN9 316 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 STK11IPQ8N1F8 1099 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 ANKRD13CQ8N6S4 541 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 TRIM47Q96LD4 638 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 P2RX7Q99572 595 aaKnown RBP10.94□□□□□ -0.66
C1orf56-203ENST00000473308 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 DOCK3Q8IZD9 2030 aa10.94□□□□□ -0.66
C1orf56-203ENST00000473308 GNRH1P01148 92 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 VCAM1P19320 739 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 SDSP20132 328 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
C1orf56-203ENST00000473308 ICA1Q05084 483 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 ALX1Q15699 326 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
C1orf56-203ENST00000473308 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
C1orf56-203ENST00000473308 NAPBQ9H115 298 aa10.93□□□□□ -0.66
C1orf56-203ENST00000473308 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
C1orf56-203ENST00000473308 BRCA2P51587 3418 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 PRDM1O75626 825 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
C1orf56-203ENST00000473308 GSPT1P15170 499 aaKnown RBP10.92□□□□□ -0.66
C1orf56-203ENST00000473308 HERVK_113P62684 666 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 PPARAQ07869 468 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 TTC22Q5TAA0 569 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 MKNK2Q9HBH9 465 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 TXNRD2Q9NNW7 524 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 SRRDQ9UH36 339 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 PTCH2Q9Y6C5 1203 aa10.92□□□□□ -0.66
C1orf56-203ENST00000473308 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
C1orf56-203ENST00000473308 MGAMO43451 1857 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 PEX10O60683 326 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
C1orf56-203ENST00000473308 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
C1orf56-203ENST00000473308 HOXD10P28358 340 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 PRMT2P55345 433 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 FCGRTP55899 365 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
C1orf56-203ENST00000473308 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 RBPJLQ9UBG7 517 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
C1orf56-203ENST00000473308 IGKV6D-41A0A0C4DH26 115 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 FGAP02671 866 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
C1orf56-203ENST00000473308 PRKCZQ05513 592 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 PDE4BQ07343 736 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 Q3C1V9 767 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 CWC27Q6UX04 472 aaKnown RBP10.9□□□□□ -0.66
C1orf56-203ENST00000473308 ZNF444Q8N0Y2 327 aaPredicted RBP10.9□□□□□ -0.66
C1orf56-203ENST00000473308 GPRC5AQ8NFJ5 357 aa10.9□□□□□ -0.66
C1orf56-203ENST00000473308 GTF3C2Q8WUA4 911 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms