RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 FKBP1BP68106 108 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 ICA1Q05084 483 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 MB21D2Q8IYB1 491 aaPredicted RBP12.36□□□□□ -0.43
UBE2F-220ENST00000472479 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 FEZ1Q99689 392 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 ZBTB21Q9ULJ3 1066 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 TNKSO95271 1327 aa12.36□□□□□ -0.43
UBE2F-220ENST00000472479 POLR2AP24928 1970 aaKnown RBP12.35□□□□□ -0.43
UBE2F-220ENST00000472479 NMT2O60551 498 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 TTLL1O95922 423 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 HUNKP57058 714 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
UBE2F-220ENST00000472479 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
UBE2F-220ENST00000472479 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 CEP95Q96GE4 821 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 TTC14Q96N46 770 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 ZHX2Q9Y6X8 837 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 CDK5RAP2Q96SN8 1893 aa12.35□□□□□ -0.43
UBE2F-220ENST00000472479 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 VGLL4Q14135 290 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 FOCADQ5VW36 1801 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 BRF1Q92994 677 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 TMEM88BA6NKF7 163 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 ANP32AP39687 249 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 ANTXR2P58335 489 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 GRM1Q13255 1194 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 CST9Q5W186 159 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-220ENST00000472479 DGKHQ86XP1 1220 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 CLEC10AQ8IUN9 316 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 CLMNQ96JQ2 1002 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 IL17RBQ9NRM6 502 aa12.34□□□□□ -0.43
UBE2F-220ENST00000472479 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 KLF18A0A0U1RQI7 1052 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 SH2B2O14492 632 aaPredicted RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 PTPRAP18433 802 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 AK2P54819 239 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 SPP2Q13103 211 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 HSCBQ8IWL3 235 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 ENAHQ8N8S7 591 aaPredicted RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 IGDCC4Q8TDY8 1250 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 KIF2CQ99661 725 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
UBE2F-220ENST00000472479 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
UBE2F-220ENST00000472479 LAMB1P07942 1786 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 MCM2P49736 904 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 JAG1P78504 1218 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
UBE2F-220ENST00000472479 CCDC96Q2M329 555 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 SSC5DA1L4H1 1573 aa12.32□□□□□ -0.44
UBE2F-220ENST00000472479 PASKQ96RG2 1323 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 ZBTB43O43298 467 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 GUCY1A2P33402 732 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 LIFRP42702 1097 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 USP14P54578 494 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 PPATQ06203 517 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 STK3Q13188 491 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 BECN1Q14457 450 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms