RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CCDC17Q96LX7 622 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 FAM227BQ96M60 508 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 NACAP1Q9BZK3 213 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 HELLSQ9NRZ9 838 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 PTPN22Q9Y2R2 807 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 MYH7P12883 1935 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 NAV1Q8NEY1 1877 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 ATAD5Q96QE3 1844 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 A0A1W2PRG0 241 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 SDSP20132 328 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 CTGFP29279 349 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 PSMC4P43686 418 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 USP14P54578 494 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 MCMDC2Q4G0Z9 681 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 ANKRD13CQ8N6S4 541 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 C12orf42Q96LP6 360 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 FEZ1Q99689 392 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 KIAA1683Q9H0B3 1180 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
SYN3-211ENST00000472027 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
SYN3-211ENST00000472027 A0A0D9SFI3 127 aa10.93□□□□□ -0.66
SYN3-211ENST00000472027 FOXP2O15409 715 aa10.93□□□□□ -0.66
SYN3-211ENST00000472027 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
SYN3-211ENST00000472027 GNRH1P01148 92 aa10.93□□□□□ -0.66
SYN3-211ENST00000472027 IRX3P78415 501 aaPredicted RBP10.93□□□□□ -0.66
SYN3-211ENST00000472027 NMIQ13287 307 aaPredicted RBP10.93□□□□□ -0.66
SYN3-211ENST00000472027 VPS53Q5VIR6 699 aa10.93□□□□□ -0.66
SYN3-211ENST00000472027 P2RX7Q99572 595 aaKnown RBP10.93□□□□□ -0.66
SYN3-211ENST00000472027 NAPBQ9H115 298 aa10.93□□□□□ -0.66
SYN3-211ENST00000472027 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 RASA1P20936 1047 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 HOXD10P28358 340 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 GCLCP48506 637 aaPredicted RBP10.92□□□□□ -0.66
SYN3-211ENST00000472027 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 ZNF444Q8N0Y2 327 aaPredicted RBP10.92□□□□□ -0.66
SYN3-211ENST00000472027 TRIM47Q96LD4 638 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
SYN3-211ENST00000472027 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 PTPRFP10586 1907 aa10.92□□□□□ -0.66
SYN3-211ENST00000472027 BAZ2AQ9UIF9 1905 aaKnown RBP10.92□□□□□ -0.66
SYN3-211ENST00000472027 ROBO3Q96MS0 1386 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 PRDM1O75626 825 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
SYN3-211ENST00000472027 VCAM1P19320 739 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 PRMT2P55345 433 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 FCGRTP55899 365 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 HERVK_113P62684 666 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 ICA1Q05084 483 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 PPARAQ07869 468 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 ALX1Q15699 326 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 FAM110CQ1W6H9 321 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 ZNF589Q86UQ0 364 aaPredicted RBP10.91□□□□□ -0.66
SYN3-211ENST00000472027 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
SYN3-211ENST00000472027 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 SRRDQ9UH36 339 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 PTCH2Q9Y6C5 1203 aa10.91□□□□□ -0.66
SYN3-211ENST00000472027 HIP1O00291 1037 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 PEX10O60683 326 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 FGAP02671 866 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
SYN3-211ENST00000472027 HSPD1P10809 573 aaKnown RBP10.9□□□□□ -0.66
SYN3-211ENST00000472027 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
SYN3-211ENST00000472027 ATP2B2Q01814 1243 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 PDE4BQ07343 736 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 Q3C1V9 767 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 TTC22Q5TAA0 569 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 CWC27Q6UX04 472 aaKnown RBP10.9□□□□□ -0.66
SYN3-211ENST00000472027 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 MORF4L1Q9UBU8 362 aa10.9□□□□□ -0.66
SYN3-211ENST00000472027 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
SYN3-211ENST00000472027 CCDC171Q6TFL3 1326 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
SYN3-211ENST00000472027 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
SYN3-211ENST00000472027 FAM47AQ5JRC9 791 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 GPRC5AQ8NFJ5 357 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 GTF3C2Q8WUA4 911 aaPredicted RBP10.89□□□□□ -0.67
SYN3-211ENST00000472027 LPAR1Q92633 364 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 SH2D4AQ9H788 454 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 INCENPQ9NQS7 918 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms