RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 LMNB2Q03252 620 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 CAMK2GQ13555 558 aaPredicted RBP6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 PWP1Q13610 501 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 CREG2Q8IUH2 290 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 FAM13CQ8NE31 585 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 FAM161BQ96MY7 647 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 SLAMF8Q9P0V8 285 aa6.3□□□□□ -1.4
PRPF40A-207ENST00000471701 UPK3BL1B0FP48 263 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 UPK3BL2E5RIL1 263 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 PF4P02776 101 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 GBP2P32456 591 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 CHMP4BP1P59074 171 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 MESP2Q0VG99 397 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 BHLHE22Q8NFJ8 381 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 SYTL4Q96C24 671 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 RSRP1Q9BUV0 290 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 VTI1BQ9UEU0 232 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
PRPF40A-207ENST00000471701 CILPO75339 1184 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 CTSHP09668 335 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 ERCC3P19447 782 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 TNNI2P48788 182 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 DNAJC14Q6Y2X3 702 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 PRR23BQ6ZRT6 265 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 TMEM74Q96NL1 305 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
PRPF40A-207ENST00000471701 MINDY4BA8MYZ0 360 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 F6X3S4 739 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 ESR1P03372 595 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 HK2P52789 917 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 SYDE1Q6ZW31 735 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 DNAJB8Q8NHS0 232 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 CYB5D2Q8WUJ1 264 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 CRELD1Q96HD1 420 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 Q96M66 194 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 C19orf73Q9NVV2 129 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 TMEM59LQ9UK28 342 aa6.27□□□□□ -1.41
PRPF40A-207ENST00000471701 DNAJC25-GNG10A0A024R161 153 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 FAM221AA4D161 298 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 WASH4PA8MWX3 477 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 F13A1P00488 732 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 MLECQ14165 292 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 RALGPS1Q5JS13 557 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 CCDC74BQ96LY2 380 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 ADAMTS10Q9H324 1103 aa6.26□□□□□ -1.41
PRPF40A-207ENST00000471701 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 GBP1P32455 592 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 FBXO33Q7Z6M2 555 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 TOX2Q96NM4 488 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 DIRC2Q96SL1 478 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 REV1Q9UBZ9 1251 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 KLHL3Q9UH77 587 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 DUSP13Q9UII6 198 aa6.25□□□□□ -1.41
PRPF40A-207ENST00000471701 CHURC1-FNTBB4DL54 471 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 NFIBO00712 420 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 TMEM253P0C7T8 217 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 EGR3Q06889 387 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 CCDC27Q2M243 656 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 TSPYL5Q86VY4 417 aaPredicted RBP6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 SLFN12Q8IYM2 578 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 PHACTR4Q8IZ21 702 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 RNF141Q8WVD5 230 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 GZF1Q9H116 711 aaPredicted RBP6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 BCL11AQ9H165 835 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 NSUN3Q9H649 340 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 PRR36Q9H6K5 1346 aa6.24□□□□□ -1.41
PRPF40A-207ENST00000471701 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 GRIN3BO60391 1043 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 SRFP11831 508 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 LTKP29376 864 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 FAM160A1Q05DH4 1040 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 MPP2Q14168 576 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 CLEC16AQ2KHT3 1053 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 OXR1Q8N573 874 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 DTWD2Q8NBA8 298 aa6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 ZSCAN18Q8TBC5 510 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 BAHD1Q8TBE0 780 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 ASCC2Q9H1I8 757 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 DCP1AQ9NPI6 582 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-207ENST00000471701 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms