RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RGS2P41220 211 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 MAGEA10P43363 369 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 CACNB2Q08289 660 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 OS9Q13438 667 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 Q3C1V9 767 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 TATDN1Q6P1N9 297 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 CEP85Q6P2H3 762 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 APBA2Q99767 749 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 EHD4Q9H223 541 aa11.02□□□□□ -0.65
SF3A1-206ENST00000471037 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
SF3A1-206ENST00000471037 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 GH2P01242 217 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 SYN1P17600 705 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 CYP7A1P22680 504 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 LHX8Q68G74 356 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 LBX2Q6XYB7 198 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 TDHQ8IZJ6 230 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 SLC17A8Q8NDX2 589 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 PAGR1Q9BTK6 254 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 RWDD1Q9H446 243 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 TLR7Q9NYK1 1049 aaKnown RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 SAP30BPQ9UHR5 308 aaKnown RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 RABGAP1Q9Y3P9 1069 aa11.01□□□□□ -0.65
SF3A1-206ENST00000471037 MYO5AQ9Y4I1 1855 aaKnown RBP11.01□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L15C9J2P7 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L11C9JVI0 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L18D6R9N7 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L22D6RA61 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L19D6RCP7 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L20D6RJB6 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 CNMDO75829 334 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 CCND3P30281 292 aaPredicted RBP11□□□□□ -0.65
SF3A1-206ENST00000471037 USP14P54578 494 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 CCNA1P78396 465 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 USP17L24Q0WX57 530 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 MAP2K5Q13163 448 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 CCL14Q16627 93 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
SF3A1-206ENST00000471037 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
SF3A1-206ENST00000471037 EAF2Q96CJ1 260 aaPredicted RBP11□□□□□ -0.65
SF3A1-206ENST00000471037 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
SF3A1-206ENST00000471037 IDH1O75874 414 aaKnown RBP10.99□□□□□ -0.65
SF3A1-206ENST00000471037 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
SF3A1-206ENST00000471037 HOXC6P09630 235 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 VCAM1P19320 739 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 CATSPERGQ6ZRH7 1159 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 TTC6Q86TZ1 520 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 FEZ1Q99689 392 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 MYH1P12882 1939 aa10.99□□□□□ -0.65
SF3A1-206ENST00000471037 COL6A3P12111 3177 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 FRMPD3Q5JV73 1810 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 SLC15A5A6NIM6 579 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 DLL1O00548 723 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 PTPREP23469 700 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 USP5P45974 858 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 LRRC26Q2I0M4 334 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
SF3A1-206ENST00000471037 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 CCDC8Q9H0W5 538 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
SF3A1-206ENST00000471037 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-206ENST00000471037 MSCO60682 206 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 IGHA2P01877 340 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 IGHDP01880 384 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 SHMT1P34896 483 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 GABPAQ06546 454 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 MAP3K12Q12852 859 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 GRB14Q14449 540 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 RAB3GAP1Q15042 981 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 ZYXQ15942 572 aaKnown RBP10.97□□□□□ -0.65
SF3A1-206ENST00000471037 MFSD14CQ5VZR4 134 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 ACER1Q8TDN7 264 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 ANTXR1Q9H6X2 564 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 CABP5Q9NP86 173 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 FLRT1Q9NZU1 646 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 BTBD7Q9P203 1132 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
SF3A1-206ENST00000471037 A0A0G2JMZ2 1700 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 PLCD1P51178 756 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 Q7L0L9 218 aa10.96□□□□□ -0.65
SF3A1-206ENST00000471037 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms