RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 NOVP48745 357 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 VEGFBP49765 207 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ICA1Q05084 483 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 TRDNQ13061 729 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 SPP2Q13103 211 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ADCK5Q3MIX3 580 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 CYB5R4Q7L1T6 521 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ZNF280CQ8ND82 737 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 ZIC5Q96T25 663 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 BACH2Q9BYV9 841 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 MTMR4Q9NYA4 1195 aa12.47□□□□□ -0.41
SMC1A-206ENST00000470241 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 CXCL11O14625 94 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 AOC2O75106 756 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.41
SMC1A-206ENST00000470241 MCCP23508 829 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 ECE1P42892 770 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 ANTXR2P58335 489 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 GRM1Q13255 1194 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 RALYLQ86SE5 291 aaKnown RBP12.46□□□□□ -0.41
SMC1A-206ENST00000470241 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
SMC1A-206ENST00000470241 DOCK1Q14185 1865 aa12.46□□□□□ -0.42
SMC1A-206ENST00000470241 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
SMC1A-206ENST00000470241 BACE1P56817 501 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 KIF23Q02241 960 aaPredicted RBP12.45□□□□□ -0.42
SMC1A-206ENST00000470241 NOGQ13253 232 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 DGKZQ13574 1117 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 MOGSQ13724 837 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 KRT32Q14532 448 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 ZKSCAN3Q9BRR0 538 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
SMC1A-206ENST00000470241 A0A0G2JLL6 359 aaPredicted RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 TESPA1A2RU30 521 aaPredicted RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 TTLL1O95922 423 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 GTF2A2P52657 109 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 ATP2B2Q01814 1243 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 MTMR2Q13614 643 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 PRRT2Q7Z6L0 340 aaPredicted RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 IQCA1Q86XH1 822 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 DNAJC5GQ8N7S2 189 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 MKL1Q969V6 931 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 ZSCAN10Q96SZ4 725 aaPredicted RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 TMX2Q9Y320 296 aa12.44□□□□□ -0.42
SMC1A-206ENST00000470241 GREB1LQ9C091 1923 aaPredicted RBP12.44□□□□□ -0.42
SMC1A-206ENST00000470241 TNKSO95271 1327 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 MANSC4A6NHS7 340 aaPredicted RBP12.43□□□□□ -0.42
SMC1A-206ENST00000470241 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 PRC1O43663 620 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 CPA1P15085 419 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 MCM5P33992 734 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 HMGCS2P54868 508 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 ANAPC15P60006 121 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 SEC23AQ15436 765 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 CCL15Q16663 113 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 KIAA1755Q5JYT7 1200 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
SMC1A-206ENST00000470241 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
SMC1A-206ENST00000470241 C12orf42Q96LP6 360 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 TTC14Q96N46 770 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 FEZ1Q99689 392 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 PTPN18Q99952 460 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 TMEM47Q9BQJ4 181 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
SMC1A-206ENST00000470241 ATAD5Q96QE3 1844 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 TOP1P11387 765 aaKnown RBP12.42□□□□□ -0.42
SMC1A-206ENST00000470241 CETPP11597 493 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 MAP2K2P36507 400 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 RBM25P49756 843 aaKnown RBP12.42□□□□□ -0.42
SMC1A-206ENST00000470241 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
SMC1A-206ENST00000470241 ZYXQ15942 572 aaKnown RBP12.42□□□□□ -0.42
SMC1A-206ENST00000470241 CCDC178Q5BJE1 867 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 GPAT2Q6NUI2 795 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
SMC1A-206ENST00000470241 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
SMC1A-206ENST00000470241 IGDCC4Q8TDY8 1250 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms