RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CEP131Q9UPN4 1083 aa9.48□□□□□ -0.89
COL11A1-208ENST00000470170 GARTP22102 1010 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 ERMP1Q7Z2K6 904 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 THAP5Q7Z6K1 395 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 CYB5D2Q8WUJ1 264 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 Q96M66 194 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 REV1Q9UBZ9 1251 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 CTNND2Q9UQB3 1225 aa9.47□□□□□ -0.89
COL11A1-208ENST00000470170 YARSP54577 528 aaKnown RBP9.46□□□□□ -0.9
COL11A1-208ENST00000470170 POU5F2Q8N7G0 328 aa9.46□□□□□ -0.9
COL11A1-208ENST00000470170 KLHL3Q9UH77 587 aa9.46□□□□□ -0.9
COL11A1-208ENST00000470170 PRR36Q9H6K5 1346 aa9.46□□□□□ -0.9
COL11A1-208ENST00000470170 WASH4PA8MWX3 477 aa9.45□□□□□ -0.9
COL11A1-208ENST00000470170 TLR3O15455 904 aaKnown RBP9.45□□□□□ -0.9
COL11A1-208ENST00000470170 HTR3BO95264 441 aa9.45□□□□□ -0.9
COL11A1-208ENST00000470170 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL11A1-208ENST00000470170 MPP2Q14168 576 aa9.45□□□□□ -0.9
COL11A1-208ENST00000470170 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
COL11A1-208ENST00000470170 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
COL11A1-208ENST00000470170 REC114Q7Z4M0 266 aa9.45□□□□□ -0.9
COL11A1-208ENST00000470170 CHURC1-FNTBB4DL54 471 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 DNAJA2O60884 412 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 FBXL19Q6PCT2 694 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 FAM196AQ6ZSG2 479 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 PIWIL2Q8TC59 973 aaKnown RBP9.44□□□□□ -0.9
COL11A1-208ENST00000470170 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
COL11A1-208ENST00000470170 FYB2Q5VWT5 728 aa9.43□□□□□ -0.9
COL11A1-208ENST00000470170 ZSWIM9Q86XI8 627 aa9.43□□□□□ -0.9
COL11A1-208ENST00000470170 C8AP07357 584 aa9.42□□□□□ -0.9
COL11A1-208ENST00000470170 KCNMB1Q16558 191 aa9.42□□□□□ -0.9
COL11A1-208ENST00000470170 ZNF648Q5T619 568 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-208ENST00000470170 BAHD1Q8TBE0 780 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-208ENST00000470170 TMEM40Q8WWA1 233 aa9.42□□□□□ -0.9
COL11A1-208ENST00000470170 DUSP15Q9H1R2 295 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-208ENST00000470170 LRRN2O75325 713 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 ESR1P03372 595 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 EIF4A3P38919 411 aaKnown RBP9.41□□□□□ -0.9
COL11A1-208ENST00000470170 TNNI2P48788 182 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 DTWD2Q8NBA8 298 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 ALPK1Q96QP1 1244 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 SLAMF8Q9P0V8 285 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
COL11A1-208ENST00000470170 AFMP43652 599 aa9.4□□□□□ -0.9
COL11A1-208ENST00000470170 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
COL11A1-208ENST00000470170 TMPRSS7Q7RTY8 843 aa9.4□□□□□ -0.9
COL11A1-208ENST00000470170 CREG2Q8IUH2 290 aa9.4□□□□□ -0.9
COL11A1-208ENST00000470170 RNF141Q8WVD5 230 aa9.4□□□□□ -0.9
COL11A1-208ENST00000470170 KCNQ5Q9NR82 932 aa9.4□□□□□ -0.9
COL11A1-208ENST00000470170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL11A1-208ENST00000470170 SUPT16HQ9Y5B9 1047 aaKnown RBP9.4□□□□□ -0.9
COL11A1-208ENST00000470170 ZNF503-AS2A6NEH8 195 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 TPP2P29144 1249 aaPredicted RBP9.39□□□□□ -0.91
COL11A1-208ENST00000470170 GDNFP39905 211 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 PHACTR4Q8IZ21 702 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 CCDC74BQ96LY2 380 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 BRMS1Q9HCU9 246 aa9.39□□□□□ -0.91
COL11A1-208ENST00000470170 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 GREM1O60565 184 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 CRKP46108 304 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 GAB4Q2WGN9 574 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 RALGPS1Q5JS13 557 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 ZNF296Q8WUU4 475 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-208ENST00000470170 KIRREL1Q96J84 757 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 KIF2CQ99661 725 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 LRRC3Q9BY71 257 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 GPR62Q9BZJ7 368 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
COL11A1-208ENST00000470170 KCNH3Q9ULD8 1083 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 PCDHB14Q9Y5E9 798 aa9.38□□□□□ -0.91
COL11A1-208ENST00000470170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-208ENST00000470170 SRFP11831 508 aa9.37□□□□□ -0.91
COL11A1-208ENST00000470170 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-208ENST00000470170 LIN37Q96GY3 246 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-208ENST00000470170 GPATCH2Q9NW75 528 aa9.37□□□□□ -0.91
COL11A1-208ENST00000470170 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
COL11A1-208ENST00000470170 DUSP13Q9UII6 198 aa9.37□□□□□ -0.91
COL11A1-208ENST00000470170 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
COL11A1-208ENST00000470170 LRRC10BA6NIK2 292 aa9.36□□□□□ -0.91
COL11A1-208ENST00000470170 FARP2O94887 1054 aaPredicted RBP9.36□□□□□ -0.91
COL11A1-208ENST00000470170 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
COL11A1-208ENST00000470170 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
COL11A1-208ENST00000470170 ROBO2Q9HCK4 1378 aa9.36□□□□□ -0.91
COL11A1-208ENST00000470170 ZNF124Q15973 351 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 MLANAQ16655 118 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 ARSHQ5FYA8 562 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 LDLRAD1Q5T700 205 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 TSPYL5Q86VY4 417 aaPredicted RBP9.35□□□□□ -0.91
COL11A1-208ENST00000470170 ASPNQ9BXN1 380 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
COL11A1-208ENST00000470170 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 GLI1P08151 1106 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 GBP1P32455 592 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 HK2P52789 917 aa9.34□□□□□ -0.91
COL11A1-208ENST00000470170 MLECQ14165 292 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms