RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MYPNQ86TC9 1320 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 SALL3Q9BXA9 1300 aa21.03■□□□□ 0.96
MRPL28-208ENST00000469744 RBBP6Q7Z6E9 1792 aaKnown RBP21.02■□□□□ 0.96
MRPL28-208ENST00000469744 CYP2D7A0A087X1C5 515 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 FCGRTP55899 365 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 ZSCAN25Q6NSZ9 544 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 KBTBD3Q8NAB2 608 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 DOCK3Q8IZD9 2030 aa21.02■□□□□ 0.96
MRPL28-208ENST00000469744 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 PRKCZQ05513 592 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 PABPC4Q13310 644 aaKnown RBP eCLIP21.01■□□□□ 0.951e-8■■■■■ 39.2
MRPL28-208ENST00000469744 FEZ1Q99689 392 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 GABRQQ9UN88 632 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 SLC4A4Q9Y6R1 1079 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 MKI67P46013 3256 aaKnown RBP21.01■□□□□ 0.95
MRPL28-208ENST00000469744 C19orf81C9J6K1 198 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 PEX10O60683 326 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 IRX3P78415 501 aaPredicted RBP21.01■□□□□ 0.95
MRPL28-208ENST00000469744 RAET1EQ8TD07 263 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 ACER1Q8TDN7 264 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 EMILIN3Q9NT22 766 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 STAP2Q9UGK3 403 aa21.01■□□□□ 0.95
MRPL28-208ENST00000469744 MPHOSPH10O00566 681 aaKnown RBP21■□□□□ 0.95
MRPL28-208ENST00000469744 HOXD10P28358 340 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 GUCY1A2P33402 732 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 PDE1AP54750 535 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 PRMT2P55345 433 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 NBPF11Q86T75 865 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 PI4K2BQ8TCG2 481 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 CABP5Q9NP86 173 aa21■□□□□ 0.95
MRPL28-208ENST00000469744 TNPO2O14787 897 aaKnown RBP20.99■□□□□ 0.95
MRPL28-208ENST00000469744 SEPT2Q15019 361 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 FAM110CQ1W6H9 321 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 USP17L2Q6R6M4 530 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 CASC1Q6TDU7 716 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 OSBP2Q969R2 916 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 SNX21Q969T3 373 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 P2RX7Q99572 595 aaKnown RBP20.99■□□□□ 0.95
MRPL28-208ENST00000469744 TTC41PQ6P2S7 1318 aa20.99■□□□□ 0.95
MRPL28-208ENST00000469744 USP17L12C9JPN9 530 aa20.98■□□□□ 0.95
MRPL28-208ENST00000469744 USP17L21D6R901 530 aa20.98■□□□□ 0.95
MRPL28-208ENST00000469744 SDSP20132 328 aa20.98■□□□□ 0.95
MRPL28-208ENST00000469744 MX1P20591 662 aa20.98■□□□□ 0.95
MRPL28-208ENST00000469744 GCLCP48506 637 aaPredicted RBP20.98■□□□□ 0.95
MRPL28-208ENST00000469744 RNF113AO15541 343 aaKnown RBP20.97■□□□□ 0.95
MRPL28-208ENST00000469744 EN2P19622 333 aaPredicted RBP20.97■□□□□ 0.95
MRPL28-208ENST00000469744 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
MRPL28-208ENST00000469744 C12orf60Q5U649 245 aa20.97■□□□□ 0.95
MRPL28-208ENST00000469744 CLEC10AQ8IUN9 316 aa20.97■□□□□ 0.95
MRPL28-208ENST00000469744 APPBP2Q92624 585 aa20.97■□□□□ 0.95
MRPL28-208ENST00000469744 STRBPQ96SI9 672 aaKnown RBP20.97■□□□□ 0.95
MRPL28-208ENST00000469744 TMEM106CQ9BVX2 250 aa20.97■□□□□ 0.95
MRPL28-208ENST00000469744 ERC2O15083 957 aa20.96■□□□□ 0.95
MRPL28-208ENST00000469744 GRK4P32298 578 aa20.96■□□□□ 0.95
MRPL28-208ENST00000469744 M0R2C6 588 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 GLRX3O76003 335 aaKnown RBP20.95■□□□□ 0.94
MRPL28-208ENST00000469744 FLT3LGP49771 235 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 HERVK_113P62684 666 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 MTFR1Q15390 333 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 CTR9Q6PD62 1173 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 AMOTL1Q8IY63 956 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 KIAA1683Q9H0B3 1180 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 TXNRD2Q9NNW7 524 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 SWAP70Q9UH65 585 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 TAOK2Q9UL54 1235 aa20.95■□□□□ 0.94
MRPL28-208ENST00000469744 AKR1B1P15121 316 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 ELNP15502 786 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 FSD1Q9BTV5 496 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 BIN2Q9UBW5 565 aaPredicted RBP20.94■□□□□ 0.94
MRPL28-208ENST00000469744 A0A1W2PRG0 241 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 GPAA1O43292 621 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 ZFYP08048 801 aaPredicted RBP20.94■□□□□ 0.94
MRPL28-208ENST00000469744 VCAM1P19320 739 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 CDK8P49336 464 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 NBR1Q14596 966 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 POTEEQ6S8J3 1075 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 STK11IPQ8N1F8 1099 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 C12orf42Q96LP6 360 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 SEC62Q99442 399 aaKnown RBP20.94■□□□□ 0.94
MRPL28-208ENST00000469744 PAGR1Q9BTK6 254 aa20.94■□□□□ 0.94
MRPL28-208ENST00000469744 USP14P54578 494 aa20.93■□□□□ 0.94
MRPL28-208ENST00000469744 TMEM179Q6ZVK1 233 aa20.93■□□□□ 0.94
MRPL28-208ENST00000469744 C16orf86Q6ZW13 317 aa20.93■□□□□ 0.94
MRPL28-208ENST00000469744 COA7Q96BR5 231 aa20.93■□□□□ 0.94
MRPL28-208ENST00000469744 MORF4L1Q9UBU8 362 aa20.93■□□□□ 0.94
MRPL28-208ENST00000469744 PLXNB2O15031 1838 aa20.92■□□□□ 0.94
MRPL28-208ENST00000469744 ADCY3O60266 1144 aa20.92■□□□□ 0.94
MRPL28-208ENST00000469744 HSCBQ8IWL3 235 aa20.92■□□□□ 0.94
MRPL28-208ENST00000469744 EPB41L4AQ9HCS5 686 aaPredicted RBP20.92■□□□□ 0.94
MRPL28-208ENST00000469744 RBPJLQ9UBG7 517 aa20.92■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L15C9J2P7 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L13C9JLJ4 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L11C9JVI0 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L18D6R9N7 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L22D6RA61 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L17D6RBQ6 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L19D6RCP7 530 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms