RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 ZNFX1Q9P2E3 1918 aaKnown RBP15.75■□□□□ 0.11
HDAC6-217ENST00000469223 ALDH1L1O75891 902 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 HOXC6P09630 235 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 PTPREP23469 700 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 GRB14Q14449 540 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 KHSRPQ92945 711 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC6-217ENST00000469223 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
HDAC6-217ENST00000469223 RHBDL3P58872 404 aa15.74■□□□□ 0.11
HDAC6-217ENST00000469223 CCNA1P78396 465 aa15.74■□□□□ 0.11
HDAC6-217ENST00000469223 AAK1Q2M2I8 961 aa15.74■□□□□ 0.11
HDAC6-217ENST00000469223 SHROOM1Q2M3G4 852 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-217ENST00000469223 SRCIN1Q9C0H9 1055 aa15.74■□□□□ 0.11
HDAC6-217ENST00000469223 TMEM39AQ9NV64 488 aa15.74■□□□□ 0.11
HDAC6-217ENST00000469223 SEPT4O43236 478 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 GPR37L1O60883 481 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 IGHA2P01877 340 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 PHKA1P46020 1223 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 JAG1P78504 1218 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 SKIV2LQ15477 1246 aaKnown RBP15.73■□□□□ 0.11
HDAC6-217ENST00000469223 NKX2-4Q9H2Z4 354 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
HDAC6-217ENST00000469223 DENND2AQ9ULE3 1009 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 PHF24Q9UPV7 400 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
HDAC6-217ENST00000469223 TRIOO75962 3097 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 ZNF318Q5VUA4 2279 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 ASNSP08243 561 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
HDAC6-217ENST00000469223 SLF2Q8IX21 1173 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
HDAC6-217ENST00000469223 ABCF2Q9UG63 623 aa15.72■□□□□ 0.11
HDAC6-217ENST00000469223 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 C19orf81C9J6K1 198 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 GDF11O95390 407 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 RAB30Q15771 203 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 ATP2B3Q16720 1220 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 TMEM240Q5SV17 173 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
HDAC6-217ENST00000469223 MSRAQ9UJ68 235 aa15.71■□□□□ 0.11
HDAC6-217ENST00000469223 A0A1W2PQ45 241 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-217ENST00000469223 A0A1W2PQY0 241 aa15.7■□□□□ 0.1
HDAC6-217ENST00000469223 SEMA3EO15041 775 aa15.7■□□□□ 0.1
HDAC6-217ENST00000469223 ERC2O15083 957 aa15.7■□□□□ 0.1
HDAC6-217ENST00000469223 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
HDAC6-217ENST00000469223 RASIP1Q5U651 963 aa15.7■□□□□ 0.1
HDAC6-217ENST00000469223 FAM163AQ96GL9 167 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-217ENST00000469223 EMILIN3Q9NT22 766 aa15.7■□□□□ 0.1
HDAC6-217ENST00000469223 COL4A4P53420 1690 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-217ENST00000469223 GPR75-ASB3A0A0A6YYF3 556 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 EYA2O00167 538 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 ADORA2AP29274 412 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 FAAP100Q0VG06 881 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 ZYXQ15942 572 aaKnown RBP15.69■□□□□ 0.1
HDAC6-217ENST00000469223 PRAMEF19Q5SWL8 479 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 OLFML2BQ68BL8 750 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 DPP9Q86TI2 863 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 BTBD7Q9P203 1132 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
HDAC6-217ENST00000469223 YBX2Q9Y2T7 364 aaKnown RBP15.69■□□□□ 0.1
HDAC6-217ENST00000469223 MYH1P12882 1939 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 VAMP4O75379 141 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 TIMP1P01033 207 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 MECOMQ03112 1051 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 PPIGQ13427 754 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■■□□ 17.2
HDAC6-217ENST00000469223 RASGRF1Q13972 1273 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 ZNF384Q8TF68 577 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 DNAJC18Q9H819 358 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 SLC28A3Q9HAS3 691 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 TBX21Q9UL17 535 aa15.68■□□□□ 0.1
HDAC6-217ENST00000469223 COL11A1P12107 1806 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-217ENST00000469223 PGK1P00558 417 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 ACRP10323 421 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 MFSD5Q6N075 450 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 PSRC1Q6PGN9 363 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 FEZ1Q99689 392 aa15.67■□□□□ 0.1
HDAC6-217ENST00000469223 PARP14Q460N5 1801 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L15C9J2P7 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L13C9JLJ4 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L11C9JVI0 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L18D6R9N7 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L22D6RA61 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L17D6RBQ6 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L19D6RCP7 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 USP17L20D6RJB6 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 APBB1O00213 710 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 CSF2RAP15509 400 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 ADORA1P30542 326 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 NHLH1Q02575 133 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms