RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 C16orf86Q6ZW13 317 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 CLEC10AQ8IUN9 316 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 MYPNQ86TC9 1320 aa13.84□□□□□ -0.19
CDHR3-205ENST00000468143 NAV1Q8NEY1 1877 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
CDHR3-205ENST00000468143 GCLCP48506 637 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-205ENST00000468143 TDO2P48775 406 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 NUCB1Q02818 461 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 MLLT1Q03111 559 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-205ENST00000468143 PRKCZQ05513 592 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 TMEM179Q6ZVK1 233 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 IFNL3Q8IZI9 196 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 KIAA1683Q9H0B3 1180 aa13.83□□□□□ -0.2
CDHR3-205ENST00000468143 EPB41L4AQ9HCS5 686 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-205ENST00000468143 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-205ENST00000468143 DDX60LQ5H9U9 1706 aaKnown RBP13.82□□□□□ -0.2
CDHR3-205ENST00000468143 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
CDHR3-205ENST00000468143 GNAT2P19087 354 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 USP14P54578 494 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 PRMT2P55345 433 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 HERVK_113P62684 666 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 SBK1Q52WX2 424 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 SIAH1Q8IUQ4 282 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
CDHR3-205ENST00000468143 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L15C9J2P7 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L13C9JLJ4 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L11C9JVI0 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L18D6R9N7 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L22D6RA61 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L17D6RBQ6 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L19D6RCP7 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L20D6RJB6 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 VCAM1P19320 739 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 USP17L24Q0WX57 530 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 Q3C1V9 767 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 KIAA1755Q5JYT7 1200 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 ZNF333Q96JL9 665 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
CDHR3-205ENST00000468143 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
CDHR3-205ENST00000468143 PTPRFP10586 1907 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 PRDM1O75626 825 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 FLT3LGP49771 235 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 ICA1Q05084 483 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 GPRC5AQ8NFJ5 357 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 COA7Q96BR5 231 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 NACAP1Q9BZK3 213 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 BIN2Q9UBW5 565 aaPredicted RBP13.8□□□□□ -0.2
CDHR3-205ENST00000468143 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
CDHR3-205ENST00000468143 RAD21O60216 631 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 EEF2P13639 858 aaKnown RBP13.79□□□□□ -0.2
CDHR3-205ENST00000468143 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
CDHR3-205ENST00000468143 RASA1P20936 1047 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 GRK4P32298 578 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 SPICE1Q8N0Z3 855 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDHR3-205ENST00000468143 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 NAPBQ9H115 298 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 ARHGEF10LQ9HCE6 1279 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
CDHR3-205ENST00000468143 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 FOXP2O15409 715 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 ADCY3O60266 1144 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 ELNP15502 786 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
CDHR3-205ENST00000468143 MTFR1Q15390 333 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
CDHR3-205ENST00000468143 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
CDHR3-205ENST00000468143 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 MYH7P12883 1935 aa13.78□□□□□ -0.2
CDHR3-205ENST00000468143 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms