RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
RB1-202ENST00000467505 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
RB1-202ENST00000467505 MYH8P13535 1937 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 CYP2B6P20813 491 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
RB1-202ENST00000467505 PAGR1Q9BTK6 254 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 RBPJLQ9UBG7 517 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 RABGAP1Q9Y3P9 1069 aa17.45■□□□□ 0.38
RB1-202ENST00000467505 APBB1O00213 710 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 GOLIM4O00461 696 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 PDE6AP16499 860 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 RGS2P41220 211 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
RB1-202ENST00000467505 TRIB2Q92519 343 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
RB1-202ENST00000467505 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
RB1-202ENST00000467505 TXNRD2Q9NNW7 524 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 CEP290O15078 2479 aa17.44■□□□□ 0.38
RB1-202ENST00000467505 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
RB1-202ENST00000467505 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.388e-7■■■■□ 22.5
RB1-202ENST00000467505 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 ZBTB40Q9NUA8 1239 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 MCM9Q9NXL9 1143 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
RB1-202ENST00000467505 VCAM1P19320 739 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 PLCD1P51178 756 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 GPR142Q7Z601 462 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 AMOTL1Q8IY63 956 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 APBA2Q99767 749 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 SWAP70Q9UH65 585 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 MYH7P12883 1935 aa17.42■□□□□ 0.38
RB1-202ENST00000467505 A0A1W2PPC1 479 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
RB1-202ENST00000467505 PRKAR2AP13861 404 aaKnown RBP17.41■□□□□ 0.38
RB1-202ENST00000467505 SHMT1P34896 483 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 LBX2Q6XYB7 198 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 PAG1Q9NWQ8 432 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
RB1-202ENST00000467505 IVNS1ABPQ9Y6Y0 642 aa17.41■□□□□ 0.38
RB1-202ENST00000467505 GABPAQ06546 454 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 TRIM32Q13049 653 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 Q3C1V9 767 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 PORCNQ9H237 461 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 OGDHLQ9ULD0 1010 aa17.4■□□□□ 0.38
RB1-202ENST00000467505 ALPK3Q96L96 1907 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 ATP5JP18859 108 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 SEPT2Q15019 361 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 MORN1Q5T089 497 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 TMEM179Q6ZVK1 233 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 SDR42E1Q8WUS8 393 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 USP6NLQ92738 828 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 C11orf49Q9H6J7 331 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
RB1-202ENST00000467505 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 DCP1AQ9NPI6 582 aaPredicted RBP17.39■□□□□ 0.37
RB1-202ENST00000467505 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
RB1-202ENST00000467505 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 PEX10O60683 326 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 ADD2P35612 726 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 MFSD14CQ5VZR4 134 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
RB1-202ENST00000467505 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
RB1-202ENST00000467505 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
RB1-202ENST00000467505 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
RB1-202ENST00000467505 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 CACNB2Q08289 660 aaPredicted RBP17.37■□□□□ 0.37
RB1-202ENST00000467505 COG2Q14746 738 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 CCDC17Q96LX7 622 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 HAUS7Q99871 368 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
RB1-202ENST00000467505 SPDYE16A6NNV3 312 aaPredicted RBP17.36■□□□□ 0.37
RB1-202ENST00000467505 MSCO60682 206 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 PTPREP23469 700 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 UBE3CQ15386 1083 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 C7orf61Q8IZ16 206 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 LPAR1Q92633 364 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
RB1-202ENST00000467505 FRMPD3Q5JV73 1810 aa17.35■□□□□ 0.37
RB1-202ENST00000467505 CNMDO75829 334 aa17.35■□□□□ 0.37
RB1-202ENST00000467505 MBD4O95243 580 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms