RNA–Protein interactions for RNA: ENST00000467472.1

SIMC1-206, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 5

Gene SIMC1, Length 364 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-206ENST00000467472 FRAT1Q92837 279 aaPredicted RBP28.21■■■□□ 2.11
SIMC1-206ENST00000467472 PIH1D3Q9NQM4 214 aaKnown RBP28.21■■■□□ 2.11
SIMC1-206ENST00000467472 CNMDO75829 334 aa28.2■■■□□ 2.1
SIMC1-206ENST00000467472 GH2P01242 217 aa28.2■■■□□ 2.1
SIMC1-206ENST00000467472 ZAP70P43403 619 aa28.2■■■□□ 2.1
SIMC1-206ENST00000467472 DYNLL1P63167 89 aaKnown RBP28.2■■■□□ 2.1
SIMC1-206ENST00000467472 SSH3Q8TE77 659 aa28.2■■■□□ 2.1
SIMC1-206ENST00000467472 ZNF236Q9UL36 1845 aa28.2■■■□□ 2.1
SIMC1-206ENST00000467472 NAV1Q8NEY1 1877 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 GLRX3O76003 335 aaKnown RBP28.19■■■□□ 2.1
SIMC1-206ENST00000467472 CCNA1P78396 465 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 CERS3Q8IU89 383 aa28.19■■■□□ 2.1
SIMC1-206ENST00000467472 LBX2Q6XYB7 198 aa28.18■■■□□ 2.1
SIMC1-206ENST00000467472 CLUAP1Q96AJ1 413 aa28.18■■■□□ 2.1
SIMC1-206ENST00000467472 EDC3Q96F86 508 aaKnown RBP28.18■■■□□ 2.1
SIMC1-206ENST00000467472 EHD4Q9H223 541 aa28.18■■■□□ 2.1
SIMC1-206ENST00000467472 CYP7A1P22680 504 aa28.17■■■□□ 2.1
SIMC1-206ENST00000467472 OS9Q13438 667 aaPredicted RBP28.17■■■□□ 2.1
SIMC1-206ENST00000467472 CATSPERGQ6ZRH7 1159 aa28.17■■■□□ 2.1
SIMC1-206ENST00000467472 KIAA1683Q9H0B3 1180 aa28.17■■■□□ 2.1
SIMC1-206ENST00000467472 CWC22Q9HCG8 908 aaKnown RBP28.17■■■□□ 2.1
SIMC1-206ENST00000467472 MYH8P13535 1937 aa28.17■■■□□ 2.1
SIMC1-206ENST00000467472 SLC15A5A6NIM6 579 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 HOXC6P09630 235 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 USP14P54578 494 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 ATP8B2P98198 1209 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 MFSD14CQ5VZR4 134 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 FEZ1Q99689 392 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 FLRT1Q9NZU1 646 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 SERPINB13Q9UIV8 391 aa28.16■■■□□ 2.1
SIMC1-206ENST00000467472 DBNLQ9UJU6 430 aaKnown RBP28.16■■■□□ 2.1
SIMC1-206ENST00000467472 A0A0G2JMZ2 1700 aa28.15■■■□□ 2.1
SIMC1-206ENST00000467472 PTPREP23469 700 aa28.15■■■□□ 2.1
SIMC1-206ENST00000467472 MDM2Q00987 491 aaPredicted RBP28.15■■■□□ 2.1
SIMC1-206ENST00000467472 MSCO60682 206 aa28.14■■■□□ 2.1
SIMC1-206ENST00000467472 SURF6O75683 361 aaKnown RBP28.14■■■□□ 2.1
SIMC1-206ENST00000467472 VCAM1P19320 739 aa28.14■■■□□ 2.1
SIMC1-206ENST00000467472 ZYXQ15942 572 aaKnown RBP28.14■■■□□ 2.1
SIMC1-206ENST00000467472 FTSJ3Q8IY81 847 aaKnown RBP28.14■■■□□ 2.1
SIMC1-206ENST00000467472 TMEM57Q8N5G2 664 aa28.14■■■□□ 2.1
SIMC1-206ENST00000467472 NOP58Q9Y2X3 529 aaKnown RBP28.14■■■□□ 2.1
SIMC1-206ENST00000467472 ZNFX1Q9P2E3 1918 aaKnown RBP28.14■■■□□ 2.09
SIMC1-206ENST00000467472 USP5P45974 858 aa28.13■■■□□ 2.09
SIMC1-206ENST00000467472 GRB14Q14449 540 aa28.13■■■□□ 2.09
SIMC1-206ENST00000467472 FAM109BQ6ICB4 259 aaPredicted RBP28.13■■■□□ 2.09
SIMC1-206ENST00000467472 TMED8Q6PL24 325 aaPredicted RBP28.13■■■□□ 2.09
SIMC1-206ENST00000467472 DDX20Q9UHI6 824 aaKnown RBP28.13■■■□□ 2.09
SIMC1-206ENST00000467472 IDH1O75874 414 aaKnown RBP28.12■■■□□ 2.09
SIMC1-206ENST00000467472 IGHA2P01877 340 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 TTC6Q86TZ1 520 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 MIGA1Q8NAN2 632 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 LPAR1Q92633 364 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 SENP6Q9GZR1 1112 aaPredicted RBP28.12■■■□□ 2.09
SIMC1-206ENST00000467472 TLR7Q9NYK1 1049 aaKnown RBP28.12■■■□□ 2.09
SIMC1-206ENST00000467472 BTBD7Q9P203 1132 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 NDUFB9Q9Y6M9 179 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 PARP14Q460N5 1801 aa28.12■■■□□ 2.09
SIMC1-206ENST00000467472 POTEB2H3BUK9 544 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 RAB3GAP1Q15042 981 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 ABCB5Q2M3G0 1257 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 CERKLQ49MI3 558 aaPredicted RBP28.11■■■□□ 2.09
SIMC1-206ENST00000467472 WDR78Q5VTH9 848 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 ACER1Q8TDN7 264 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 IVNS1ABPQ9Y6Y0 642 aa28.11■■■□□ 2.09
SIMC1-206ENST00000467472 SPDYE16A6NNV3 312 aaPredicted RBP28.1■■■□□ 2.09
SIMC1-206ENST00000467472 MAGEB6Q8N7X4 407 aa28.1■■■□□ 2.09
SIMC1-206ENST00000467472 EAF2Q96CJ1 260 aaPredicted RBP28.1■■■□□ 2.09
SIMC1-206ENST00000467472 DNM1LO00429 736 aa28.09■■■□□ 2.09
SIMC1-206ENST00000467472 ATP2B2Q01814 1243 aa28.09■■■□□ 2.09
SIMC1-206ENST00000467472 NPLOC4Q8TAT6 608 aa28.09■■■□□ 2.09
SIMC1-206ENST00000467472 LBHD1Q9BQE6 289 aaPredicted RBP28.09■■■□□ 2.09
SIMC1-206ENST00000467472 CCDC8Q9H0W5 538 aaPredicted RBP28.09■■■□□ 2.09
SIMC1-206ENST00000467472 SHMT1P34896 483 aa28.08■■■□□ 2.09
SIMC1-206ENST00000467472 CABP5Q9NP86 173 aa28.08■■■□□ 2.09
SIMC1-206ENST00000467472 SMCHD1A6NHR9 2005 aa28.08■■■□□ 2.08
SIMC1-206ENST00000467472 GUCY1A2P33402 732 aa28.07■■■□□ 2.08
SIMC1-206ENST00000467472 TRPV1Q8NER1 839 aa28.07■■■□□ 2.08
SIMC1-206ENST00000467472 CHMP4BQ9H444 224 aaKnown RBP28.07■■■□□ 2.08
SIMC1-206ENST00000467472 RPAP3Q9H6T3 665 aaPredicted RBP28.07■■■□□ 2.08
SIMC1-206ENST00000467472 CYBAP13498 195 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 CNGA1P29973 690 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 CYP2C19P33261 490 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 PLCD1P51178 756 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 MAP3K12Q12852 859 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 GUCD1Q96NT3 240 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 RIOK1Q9BRS2 568 aaKnown RBP28.06■■■□□ 2.08
SIMC1-206ENST00000467472 C1orf115Q9H7X2 142 aa28.06■■■□□ 2.08
SIMC1-206ENST00000467472 COL11A1P12107 1806 aaPredicted RBP28.05■■■□□ 2.08
SIMC1-206ENST00000467472 RRP1P56182 461 aaKnown RBP28.05■■■□□ 2.08
SIMC1-206ENST00000467472 ANTXR1Q9H6X2 564 aa28.05■■■□□ 2.08
SIMC1-206ENST00000467472 ATN1P54259 1190 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms