RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 POLR3KQ9Y2Y1 108 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-209ENST00000466862 DNAJA2O60884 412 aa5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 F13A1P00488 732 aa5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 ETV3P41162 512 aa5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 CAMK2GQ13555 558 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 LIN37Q96GY3 246 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 ALPK1Q96QP1 1244 aa5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 DUSP15Q9H1R2 295 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-209ENST00000466862 WASH4PA8MWX3 477 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 PF4P02776 101 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 GLI1P08151 1106 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 CYP7A1P22680 504 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 AFMP43652 599 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 SPOCD1Q6ZMY3 1216 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 TMPRSS7Q7RTY8 843 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 SLFN12Q8IYM2 578 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 DTWD2Q8NBA8 298 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 BHLHE22Q8NFJ8 381 aaPredicted RBP5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 UBE2FQ969M7 185 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 KIRREL1Q96J84 757 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 TMEM74Q96NL1 305 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 SP110Q9HB58 689 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 KCNQ5Q9NR82 932 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.5
GTF3C3-209ENST00000466862 DNAJC25-GNG10A0A024R161 153 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 LRRC10BA6NIK2 292 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 UPK3BL1B0FP48 263 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 UPK3BL2E5RIL1 263 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 SORBS3O60504 671 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 RALGPS1Q5JS13 557 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 ERMP1Q7Z2K6 904 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 JARID2Q92833 1246 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 RSRP1Q9BUV0 290 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
GTF3C3-209ENST00000466862 DBX1A6NMT0 343 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 KRT1P04264 644 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 PDIA4P13667 645 aaKnown RBP5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 PLCG1P19174 1290 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 MLANAQ16655 118 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 FAM13CQ8NE31 585 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 RNF141Q8WVD5 230 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 FAM84AQ96KN4 292 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 LRRC3Q9BY71 257 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 FAM53CQ9NYF3 392 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 SLAMF8Q9P0V8 285 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 REV1Q9UBZ9 1251 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 TMEM59LQ9UK28 342 aa5.63□□□□□ -1.51
GTF3C3-209ENST00000466862 HTR3BO95264 441 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 TSPAN15O95858 294 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 HPXP02790 462 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 MPP2Q14168 576 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 PRR23BQ6ZRT6 265 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 REC114Q7Z4M0 266 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 FBXO27Q8NI29 283 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 VTI1BQ9UEU0 232 aa5.62□□□□□ -1.51
GTF3C3-209ENST00000466862 BPNT1O95861 308 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 ERCC3P19447 782 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 YARSP54577 528 aaKnown RBP5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 ERVFC1P60507 584 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 FAM160A1Q05DH4 1040 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 MRPL58Q14197 206 aaKnown RBP5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 FAM196AQ6ZSG2 479 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 TSPYL5Q86VY4 417 aaPredicted RBP5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 C1QL4Q86Z23 238 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 VWCEQ96DN2 955 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
GTF3C3-209ENST00000466862 RBM47A0AV96 593 aaKnown RBP5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 TPP2P29144 1249 aaPredicted RBP5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 GBP2P32456 591 aaPredicted RBP5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 KSR1Q8IVT5 923 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 CCDC120Q96HB5 630 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 KREMEN1Q96MU8 473 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 ASPNQ9BXN1 380 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 TRIT1Q9H3H1 467 aaKnown RBP5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 KBTBD4Q9NVX7 518 aa5.6□□□□□ -1.51
GTF3C3-209ENST00000466862 SHISA3A0PJX4 238 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 LRRN2O75325 713 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 ZGLP1P0C6A0 271 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 PWP1Q13610 501 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 CCDC27Q2M243 656 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 CREG2Q8IUH2 290 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 GOLM1Q8NBJ4 401 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 BAHD1Q8TBE0 780 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 ADAMTS10Q9H324 1103 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 COPRSQ9NQ92 184 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 KLHL3Q9UH77 587 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 DUSP13Q9UII6 198 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 ZNF281Q9Y2X9 895 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 PCDHA11Q9Y5I1 949 aa5.59□□□□□ -1.51
GTF3C3-209ENST00000466862 GREM1O60565 184 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 CRKP46108 304 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms