RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SEZ6Q53EL9 994 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 SLFN12Q8IYM2 578 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 AGBL5Q8NDL9 886 aa6.65□□□□□ -1.34
VPS13D-203ENST00000466732 FAM155AB1AL88 458 aaPredicted RBP6.64□□□□□ -1.35
VPS13D-203ENST00000466732 ETV3P41162 512 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 IRAK1P51617 712 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 CLCN7P51798 805 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 METTL16Q86W50 562 aaKnown RBP6.64□□□□□ -1.35
VPS13D-203ENST00000466732 SLITRK4Q8IW52 837 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 NKD1Q969G9 470 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 EHMT1Q9H9B1 1298 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
VPS13D-203ENST00000466732 SLC22A31A6NKX4 558 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 MCM4P33991 863 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 KIR3DL1P43629 444 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
VPS13D-203ENST00000466732 CLCQ05315 142 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 MLECQ14165 292 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 HSPA12BQ96MM6 686 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
VPS13D-203ENST00000466732 DDX41Q9UJV9 622 aaKnown RBP6.63□□□□□ -1.35
VPS13D-203ENST00000466732 FUT4P22083 530 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 ZNF165P49910 485 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 CDKAL1Q5VV42 579 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 GK5Q6ZS86 529 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 REXO1Q8N1G1 1221 aaKnown RBP6.62□□□□□ -1.35
VPS13D-203ENST00000466732 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
VPS13D-203ENST00000466732 CCDC74BQ96LY2 380 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 SEMA3GQ9NS98 782 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 ST14Q9Y5Y6 855 aa6.62□□□□□ -1.35
VPS13D-203ENST00000466732 TNNI2P48788 182 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 HDLBPQ00341 1268 aaKnown RBP6.61□□□□□ -1.35
VPS13D-203ENST00000466732 TNK2Q07912 1038 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
VPS13D-203ENST00000466732 CBLL1Q75N03 491 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 Q96M66 194 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 KIF2CQ99661 725 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 GMIPQ9P107 970 aa6.61□□□□□ -1.35
VPS13D-203ENST00000466732 H3BS24 57 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 IKZF1Q13422 519 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 C9orf131Q5VYM1 1079 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
VPS13D-203ENST00000466732 COL17A1Q9UMD9 1497 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-203ENST00000466732 RGS13O14921 159 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 RAG1P15918 1043 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 TAL1P17542 331 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-203ENST00000466732 GBP1P32455 592 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 ZNF792Q3KQV3 632 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 THAP5Q7Z6K1 395 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 PIWIL2Q8TC59 973 aaKnown RBP6.59□□□□□ -1.35
VPS13D-203ENST00000466732 RNF141Q8WVD5 230 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 ATG4CQ96DT6 458 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 KREMEN1Q96MU8 473 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 ANTXR1Q9H6X2 564 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 CNNM2Q9H8M5 875 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
VPS13D-203ENST00000466732 LRRN2O75325 713 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 UBOX5O94941 541 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
VPS13D-203ENST00000466732 ZP2Q05996 745 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 PAK2Q13177 524 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 UBE2FQ969M7 185 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 MBNL3Q9NUK0 354 aaKnown RBP6.58□□□□□ -1.36
VPS13D-203ENST00000466732 ZSWIM5Q9P217 1185 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 ADAMTS6Q9UKP5 1117 aa6.58□□□□□ -1.36
VPS13D-203ENST00000466732 MEIS3P2A8K0S8 358 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 POLR2BP30876 1174 aaKnown RBP6.57□□□□□ -1.36
VPS13D-203ENST00000466732 LRRFIP1Q32MZ4 808 aaKnown RBP6.57□□□□□ -1.36
VPS13D-203ENST00000466732 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 DTWD2Q8NBA8 298 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 TMEM40Q8WWA1 233 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 VWCEQ96DN2 955 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 LMCD1Q9NZU5 365 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 KCNH3Q9ULD8 1083 aa6.57□□□□□ -1.36
VPS13D-203ENST00000466732 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-203ENST00000466732 NME1P15531 152 aaKnown RBP6.56□□□□□ -1.36
VPS13D-203ENST00000466732 CHMP4BP1P59074 171 aa6.56□□□□□ -1.36
VPS13D-203ENST00000466732 ASPNQ9BXN1 380 aa6.56□□□□□ -1.36
VPS13D-203ENST00000466732 DUSP15Q9H1R2 295 aaPredicted RBP6.56□□□□□ -1.36
VPS13D-203ENST00000466732 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
VPS13D-203ENST00000466732 RC3H2Q9HBD1 1191 aaKnown RBP6.56□□□□□ -1.36
VPS13D-203ENST00000466732 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
VPS13D-203ENST00000466732 ZNRF3Q9ULT6 936 aa6.56□□□□□ -1.36
VPS13D-203ENST00000466732 WASH4PA8MWX3 477 aa6.55□□□□□ -1.36
VPS13D-203ENST00000466732 SRFP11831 508 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms