RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 UVSSAQ2YD98 709 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 TATDN1Q6P1N9 297 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.73□□□□□ -0.53
PMF1-204ENST00000466489 ZSCAN30Q86W11 494 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 ZNF444Q8N0Y2 327 aaPredicted RBP11.73□□□□□ -0.53
PMF1-204ENST00000466489 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
PMF1-204ENST00000466489 THSD7BQ9C0I4 1608 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 GZF1Q9H116 711 aaPredicted RBP11.73□□□□□ -0.53
PMF1-204ENST00000466489 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
PMF1-204ENST00000466489 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
PMF1-204ENST00000466489 CYP2D7A0A087X1C5 515 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 RRP9O43818 475 aaKnown RBP11.72□□□□□ -0.53
PMF1-204ENST00000466489 FGAP02671 866 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 MAP2K1Q02750 393 aaPredicted RBP11.72□□□□□ -0.53
PMF1-204ENST00000466489 SNAPC2Q13487 334 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 CUL4AQ13619 759 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 SH2D4AQ9H788 454 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 TOMM22Q9NS69 142 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
PMF1-204ENST00000466489 PTPRFP10586 1907 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 CXCL11O14625 94 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 GDF11O95390 407 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 CETPP11597 493 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 PTPRAP18433 802 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 SHMT1P34896 483 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
PMF1-204ENST00000466489 RNF20Q5VTR2 975 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 MFSD6Q6ZSS7 791 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 ZNF280CQ8ND82 737 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 FEZ1Q99689 392 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 ARHGEF10LQ9HCE6 1279 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 ANAPC4Q9UJX5 808 aa11.71□□□□□ -0.53
PMF1-204ENST00000466489 PHIPQ8WWQ0 1821 aa11.71□□□□□ -0.54
PMF1-204ENST00000466489 FAM155AB1AL88 458 aaPredicted RBP11.7□□□□□ -0.54
PMF1-204ENST00000466489 CA12O43570 354 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 GH2P01242 217 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 PDCP20941 246 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 NEK4P51957 841 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 USP14P54578 494 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
PMF1-204ENST00000466489 TRDNQ13061 729 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 FASTKD5Q7L8L6 764 aaKnown RBP11.7□□□□□ -0.54
PMF1-204ENST00000466489 STK11IPQ8N1F8 1099 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
PMF1-204ENST00000466489 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 MYH4Q9Y623 1939 aa11.7□□□□□ -0.54
PMF1-204ENST00000466489 CCL15-CCL14A0A0B4J2E2 113 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 TRIM75PA6NK02 468 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 TSPY2A6NKD2 308 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 C19orf81C9J6K1 198 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 IRF6O14896 467 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
PMF1-204ENST00000466489 AOC2O75106 756 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 HAND2P61296 217 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 ICA1Q05084 483 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 PABPC4Q13310 644 aaKnown RBP eCLIP11.69□□□□□ -0.54
PMF1-204ENST00000466489 CCL15Q16663 113 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
PMF1-204ENST00000466489 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 DNAJC5GQ8N7S2 189 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 WDR18Q9BV38 432 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 KRT23Q9C075 422 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 KANSL2Q9H9L4 492 aa11.69□□□□□ -0.54
PMF1-204ENST00000466489 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 FOXP2O15409 715 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 ORC4O43929 436 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 CAVIN2O95810 425 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
PMF1-204ENST00000466489 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 SPP2Q13103 211 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
PMF1-204ENST00000466489 STAG1Q8WVM7 1258 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 ESR2Q92731 530 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
PMF1-204ENST00000466489 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
PMF1-204ENST00000466489 RBM8AQ9Y5S9 174 aaKnown RBP11.68□□□□□ -0.54
PMF1-204ENST00000466489 LOC285556D6RIA3 1793 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms