RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
VCP-204ENST00000466100 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
VCP-204ENST00000466100 MTMR4Q9NYA4 1195 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 PCNTO95613 3336 aa13.13□□□□□ -0.31
VCP-204ENST00000466100 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
VCP-204ENST00000466100 NEK4P51957 841 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
VCP-204ENST00000466100 ARMC9Q7Z3E5 817 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
VCP-204ENST00000466100 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 IFIT3O14879 490 aaKnown RBP13.11□□□□□ -0.31
VCP-204ENST00000466100 PTPRAP18433 802 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 LIFRP42702 1097 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 ICA1Q05084 483 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 Q6ZUG5 572 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
VCP-204ENST00000466100 SGMS1Q86VZ5 419 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 KANSL2Q9H9L4 492 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 PDRG1Q9NUG6 133 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
VCP-204ENST00000466100 RLFQ13129 1914 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 A0A1W2PRG0 241 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
VCP-204ENST00000466100 AK2P54819 239 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 EVCP57679 992 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
VCP-204ENST00000466100 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 MKL1Q969V6 931 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 CSADQ9Y600 493 aa13.1□□□□□ -0.31
VCP-204ENST00000466100 NID2Q14112 1375 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 SPDYE5A6NIY4 337 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 TTLL1O95922 423 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
VCP-204ENST00000466100 WTAPQ15007 396 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 SART3Q15020 963 aaKnown RBP13.09□□□□□ -0.31
VCP-204ENST00000466100 RAB3GAP1Q15042 981 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 BRF1Q92994 677 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
VCP-204ENST00000466100 MYH6P13533 1939 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
VCP-204ENST00000466100 GJA5P36382 358 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 ECE1P42892 770 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 IFIT1BQ5T764 474 aaKnown RBP13.08□□□□□ -0.32
VCP-204ENST00000466100 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 ELP3Q9H9T3 547 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
VCP-204ENST00000466100 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
VCP-204ENST00000466100 ERICH2A1L162 156 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 HUNKP57058 714 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 PPATQ06203 517 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 TROAPQ12815 778 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 PPIL2Q13356 520 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 ZNF654Q8IZM8 581 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
VCP-204ENST00000466100 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 KIAA1683Q9H0B3 1180 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
VCP-204ENST00000466100 ST18O60284 1047 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 LARGE1O95461 756 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms