RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
NPHP3-203ENST00000465756 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 ZNF213O14771 459 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 ESR2Q92731 530 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 KRT23Q9C075 422 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 ADGRA1Q86SQ6 560 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
NPHP3-203ENST00000465756 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 HMGCS2P54868 508 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 PPARAQ07869 468 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 ZNF384Q8TF68 577 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
NPHP3-203ENST00000465756 IKQ13123 557 aaPredicted RBP12.74□□□□□ -0.37
NPHP3-203ENST00000465756 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 BIN2Q9UBW5 565 aaPredicted RBP12.74□□□□□ -0.37
NPHP3-203ENST00000465756 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
NPHP3-203ENST00000465756 IGHDP01880 384 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
NPHP3-203ENST00000465756 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 TNPO2O14787 897 aaKnown RBP12.73□□□□□ -0.37
NPHP3-203ENST00000465756 MCCP23508 829 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
NPHP3-203ENST00000465756 CRHR2Q13324 411 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 MTMR2Q13614 643 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 RAET1EQ8TD07 263 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 FZD1Q9UP38 647 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
NPHP3-203ENST00000465756 MAPK4P31152 587 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
NPHP3-203ENST00000465756 ZBED4O75132 1171 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 ZNF296Q8WUU4 475 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 MYH1P12882 1939 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 MYH7P12883 1935 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 GSG1L2A8MUP6 293 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 RRP12Q5JTH9 1297 aaKnown RBP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 GPRC5AQ8NFJ5 357 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 OTUD7AQ8TE49 926 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 PRKAB2O43741 272 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
NPHP3-203ENST00000465756 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
NPHP3-203ENST00000465756 TTLL1O95922 423 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
NPHP3-203ENST00000465756 SEPT2Q15019 361 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 WDR78Q5VTH9 848 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 DOCK1Q14185 1865 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 SALL3Q9BXA9 1300 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 CDC45O75419 566 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 SHMT1P34896 483 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
NPHP3-203ENST00000465756 M0R2C6 588 aa12.71□□□□□ -0.38
NPHP3-203ENST00000465756 GJA5P36382 358 aa12.71□□□□□ -0.38
NPHP3-203ENST00000465756 GABPAQ06546 454 aa12.71□□□□□ -0.38
NPHP3-203ENST00000465756 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 B4DLN1 442 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 MRPL12P52815 198 aaKnown RBP12.7□□□□□ -0.38
NPHP3-203ENST00000465756 COG2Q14746 738 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 ORC4O43929 436 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 REC8O95072 547 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
NPHP3-203ENST00000465756 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 PLCD1P51178 756 aa12.7□□□□□ -0.38
NPHP3-203ENST00000465756 SLC25A27O95847 323 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
NPHP3-203ENST00000465756 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 ANAPC4Q9UJX5 808 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 FLOT1O75955 427 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 PSMC4P43686 418 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 ZIC5Q96T25 663 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms