RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 C12orf40Q86WS4 652 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 TMEM40Q8WWA1 233 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 KLHDC7BQ96G42 594 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 CORO1BQ9BR76 489 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 PPME1Q9Y570 386 aa6.31□□□□□ -1.4
CDK13-203ENST00000465643 SLC22A31A6NKX4 558 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 LCE2BO14633 110 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 DDX3YO15523 660 aaKnown RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 DLGAP3O95886 979 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 AFF1P51825 1210 aaKnown RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 C2orf27AQ580R0 203 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 C1orf229Q6ZS94 237 aaPredicted RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 PRR36Q9H6K5 1346 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 RNF17Q9BXT8 1623 aaKnown RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 FSCN2O14926 492 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 NLRP12P59046 1061 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 PDE3AQ14432 1141 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 RNFT1Q5M7Z0 435 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 KIAA0907Q7Z7F0 614 aaPredicted RBP6.3□□□□□ -1.4
CDK13-203ENST00000465643 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 TTC9Q92623 222 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 ATG4CQ96DT6 458 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
CDK13-203ENST00000465643 MADDQ8WXG6 1647 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 UNC13BO14795 1591 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 KDM5DQ9BY66 1539 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 MEIS3P2A8K0S8 358 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 TM4SF5O14894 197 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 DNAJC6O75061 913 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 PLCG1P19174 1290 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 POLR2BP30876 1174 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 SSRP1Q08945 709 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 UNC5AQ6ZN44 842 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 SLC9A7Q96T83 725 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 NOP58Q9Y2X3 529 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 CLTCQ00610 1675 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 RIMS1Q86UR5 1692 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 DEPDC5O75140 1603 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 MROH1Q8NDA8 1641 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 PRDM15P57071 1507 aaPredicted RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 CNTLNQ9NXG0 1405 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 CYP11A1P05108 521 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 PIP4K2BP78356 416 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 DIEXFQ68CQ4 756 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 USP26Q9BXU7 913 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 CWC22Q9HCG8 908 aaKnown RBP6.29□□□□□ -1.4
CDK13-203ENST00000465643 CEP152O94986 1710 aa6.29□□□□□ -1.4
CDK13-203ENST00000465643 ABCC3O15438 1527 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 CHURC1-FNTBB4DL54 471 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
CDK13-203ENST00000465643 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
CDK13-203ENST00000465643 CEBPAP49715 358 aaPredicted RBP6.28□□□□□ -1.4
CDK13-203ENST00000465643 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 HDXQ7Z353 690 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
CDK13-203ENST00000465643 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 MPHOSPH9Q99550 1183 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 MBIPQ9NS73 344 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 FAM86C1Q9NVL1 165 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 GMIPQ9P107 970 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 ADAMTSL3P82987 1691 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 ZMYM3Q14202 1370 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 ADAM11O75078 769 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 NME1P15531 152 aaKnown RBP6.28□□□□□ -1.4
CDK13-203ENST00000465643 ANAPC15P60006 121 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 KLHL42Q9P2K6 505 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
CDK13-203ENST00000465643 FAM135AQ9P2D6 1515 aa6.27□□□□□ -1.4
CDK13-203ENST00000465643 M0R082 166 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 MARCH6O60337 910 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 ASMTLO95671 621 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 ALAS2P22557 587 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 GRK4P32298 578 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 AMPD3Q01432 767 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 LAPTM4AQ15012 233 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 C16orf86Q6ZW13 317 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 CYFIP1Q7L576 1253 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 ZNF417Q8TAU3 575 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
CDK13-203ENST00000465643 ZNF587Q96SQ5 575 aaPredicted RBP6.27□□□□□ -1.41
CDK13-203ENST00000465643 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
CDK13-203ENST00000465643 ZC3H13Q5T200 1668 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms