RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RBAK-RBAKDNI3L0D1 243 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 BPNT1O95861 308 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 PLCG1P19174 1290 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 CRELD1Q96HD1 420 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 SLAMF8Q9P0V8 285 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 CORINQ9Y5Q5 1042 aa9.4□□□□□ -0.9
SMC4-205ENST00000465563 CILPO75339 1184 aa9.39□□□□□ -0.91
SMC4-205ENST00000465563 LMNB2Q03252 620 aa9.39□□□□□ -0.91
SMC4-205ENST00000465563 CAMK2GQ13555 558 aaPredicted RBP9.39□□□□□ -0.91
SMC4-205ENST00000465563 BNC2Q6ZN30 1099 aaPredicted RBP9.39□□□□□ -0.91
SMC4-205ENST00000465563 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
SMC4-205ENST00000465563 Q96M66 194 aa9.39□□□□□ -0.91
SMC4-205ENST00000465563 F6X3S4 739 aa9.38□□□□□ -0.91
SMC4-205ENST00000465563 ESR1P03372 595 aa9.38□□□□□ -0.91
SMC4-205ENST00000465563 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
SMC4-205ENST00000465563 TTC6Q86TZ1 520 aa9.38□□□□□ -0.91
SMC4-205ENST00000465563 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
SMC4-205ENST00000465563 CYB5D2Q8WUJ1 264 aa9.38□□□□□ -0.91
SMC4-205ENST00000465563 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
SMC4-205ENST00000465563 FAM221AA4D161 298 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 UPK3BL1B0FP48 263 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 UPK3BL2E5RIL1 263 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 SORBS3O60504 671 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 PF4P02776 101 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 RAC2P15153 192 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 TMEM201Q5SNT2 666 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 PRR23BQ6ZRT6 265 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 CREG2Q8IUH2 290 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 PPP1R13LQ8WUF5 828 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 GATAD2BQ8WXI9 593 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 DUSP15Q9H1R2 295 aaPredicted RBP9.37□□□□□ -0.91
SMC4-205ENST00000465563 MRS2Q9HD23 443 aa9.37□□□□□ -0.91
SMC4-205ENST00000465563 DNAJC25-GNG10A0A024R161 153 aa9.36□□□□□ -0.91
SMC4-205ENST00000465563 F13A1P00488 732 aa9.36□□□□□ -0.91
SMC4-205ENST00000465563 TPP2P29144 1249 aaPredicted RBP9.36□□□□□ -0.91
SMC4-205ENST00000465563 GPATCH2Q9NW75 528 aa9.36□□□□□ -0.91
SMC4-205ENST00000465563 TMEM59LQ9UK28 342 aa9.36□□□□□ -0.91
SMC4-205ENST00000465563 KCNH3Q9ULD8 1083 aa9.36□□□□□ -0.91
SMC4-205ENST00000465563 WASH4PA8MWX3 477 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 GBP2P32456 591 aaPredicted RBP9.35□□□□□ -0.91
SMC4-205ENST00000465563 RALGPS1Q5JS13 557 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 TMEM74Q96NL1 305 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 PPP1R16BQ96T49 567 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 RSRP1Q9BUV0 290 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 VTI1BQ9UEU0 232 aa9.35□□□□□ -0.91
SMC4-205ENST00000465563 ITGAEP38570 1179 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 PWP1Q13610 501 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 GAB4Q2WGN9 574 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 SLFN12Q8IYM2 578 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 ABHD4Q8TB40 342 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 RHOVQ96L33 236 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 GPR62Q9BZJ7 368 aa9.34□□□□□ -0.91
SMC4-205ENST00000465563 PRR36Q9H6K5 1346 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 SRFP11831 508 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 HK2P52789 917 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 SYDE1Q6ZW31 735 aaPredicted RBP9.33□□□□□ -0.92
SMC4-205ENST00000465563 DTWD2Q8NBA8 298 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 REV1Q9UBZ9 1251 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
SMC4-205ENST00000465563 TSPAN15O95858 294 aa9.32□□□□□ -0.92
SMC4-205ENST00000465563 ERCC3P19447 782 aa9.32□□□□□ -0.92
SMC4-205ENST00000465563 TNNI2P48788 182 aa9.32□□□□□ -0.92
SMC4-205ENST00000465563 TSPYL5Q86VY4 417 aaPredicted RBP9.32□□□□□ -0.92
SMC4-205ENST00000465563 ADAMTS10Q9H324 1103 aa9.32□□□□□ -0.92
SMC4-205ENST00000465563 NSUN3Q9H649 340 aaKnown RBP9.32□□□□□ -0.92
SMC4-205ENST00000465563 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
SMC4-205ENST00000465563 SNAP47Q5SQN1 464 aa9.31□□□□□ -0.92
SMC4-205ENST00000465563 FBXO15Q8NCQ5 510 aaPredicted RBP9.31□□□□□ -0.92
SMC4-205ENST00000465563 DIRC2Q96SL1 478 aa9.31□□□□□ -0.92
SMC4-205ENST00000465563 KLHL3Q9UH77 587 aa9.31□□□□□ -0.92
SMC4-205ENST00000465563 GRIN3BO60391 1043 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 HTR3BO95264 441 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 HPXP02790 462 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 ERVFC1P60507 584 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 FAM160A1Q05DH4 1040 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 EGR3Q06889 387 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 GOLM1Q8NBJ4 401 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 TOX2Q96NM4 488 aa9.3□□□□□ -0.92
SMC4-205ENST00000465563 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
SMC4-205ENST00000465563 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
SMC4-205ENST00000465563 CHURC1-FNTBB4DL54 471 aa9.29□□□□□ -0.92
SMC4-205ENST00000465563 LRRN2O75325 713 aa9.29□□□□□ -0.92
SMC4-205ENST00000465563 MPP2Q14168 576 aa9.29□□□□□ -0.92
SMC4-205ENST00000465563 LCE1DQ5T752 114 aa9.29□□□□□ -0.92
SMC4-205ENST00000465563 LTKP29376 864 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 KRTAP19-4Q3LI73 84 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 ANKLE2Q86XL3 938 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 BAHD1Q8TBE0 780 aaPredicted RBP9.28□□□□□ -0.92
SMC4-205ENST00000465563 KREMEN1Q96MU8 473 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 ASPNQ9BXN1 380 aa9.28□□□□□ -0.92
SMC4-205ENST00000465563 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 REC114Q7Z4M0 266 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 CILP2Q8IUL8 1156 aa9.27□□□□□ -0.93
SMC4-205ENST00000465563 PHACTR4Q8IZ21 702 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms