RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 DUSP15Q9H1R2 295 aaPredicted RBP5.27□□□□□ -1.57
SNX4-202ENST00000465505 DNAJC25-GNG10A0A024R161 153 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 UPK3BL1B0FP48 263 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 UPK3BL2E5RIL1 263 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 ETV3P41162 512 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 PSMD2Q13200 908 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 DNAJC14Q6Y2X3 702 aaPredicted RBP5.26□□□□□ -1.57
SNX4-202ENST00000465505 SPOCD1Q6ZMY3 1216 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 TMPRSS7Q7RTY8 843 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 TMC4Q7Z404 712 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 CCDC84Q86UT8 332 aaPredicted RBP5.26□□□□□ -1.57
SNX4-202ENST00000465505 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 CORINQ9Y5Q5 1042 aa5.26□□□□□ -1.57
SNX4-202ENST00000465505 FAM221AA4D161 298 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 CILPO75339 1184 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 KRT1P04264 644 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 SRFP11831 508 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 GAB4Q2WGN9 574 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 FBLN7Q53RD9 439 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 RALGPS1Q5JS13 557 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 MPZL3Q6UWV2 235 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 BNC2Q6ZN30 1099 aaPredicted RBP5.25□□□□□ -1.57
SNX4-202ENST00000465505 TTC6Q86TZ1 520 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 FAM161BQ96MY7 647 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 SLAMF8Q9P0V8 285 aa5.25□□□□□ -1.57
SNX4-202ENST00000465505 PLCG1P19174 1290 aa5.24□□□□□ -1.57
SNX4-202ENST00000465505 RAP1GAPP47736 663 aa5.24□□□□□ -1.57
SNX4-202ENST00000465505 XPCQ01831 940 aaPredicted RBP5.24□□□□□ -1.57
SNX4-202ENST00000465505 CAMK2GQ13555 558 aaPredicted RBP5.24□□□□□ -1.57
SNX4-202ENST00000465505 TMEM201Q5SNT2 666 aa5.24□□□□□ -1.57
SNX4-202ENST00000465505 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
SNX4-202ENST00000465505 FBXO33Q7Z6M2 555 aa5.24□□□□□ -1.57
SNX4-202ENST00000465505 ADAMTS10Q9H324 1103 aa5.24□□□□□ -1.57
SNX4-202ENST00000465505 TSPAN15O95858 294 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 PF4P02776 101 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 TPP2P29144 1249 aaPredicted RBP5.23□□□□□ -1.57
SNX4-202ENST00000465505 ERVFC1P60507 584 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 LMNB2Q03252 620 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 CREG2Q8IUH2 290 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 AEBP1Q8IUX7 1158 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 FAM13CQ8NE31 585 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 ABHD4Q8TB40 342 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 CYB5D2Q8WUJ1 264 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 GATAD2BQ8WXI9 593 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 GPR62Q9BZJ7 368 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 TRIT1Q9H3H1 467 aaKnown RBP5.23□□□□□ -1.57
SNX4-202ENST00000465505 TMEM59LQ9UK28 342 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 PRR36Q9H6K5 1346 aa5.23□□□□□ -1.57
SNX4-202ENST00000465505 F6X3S4 739 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 LRRN2O75325 713 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 F13A1P00488 732 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 HPXP02790 462 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 RAC2P15153 192 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 CFPP27918 469 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 HK2P52789 917 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 SLFN12Q8IYM2 578 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 DTWD2Q8NBA8 298 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 FBXO15Q8NCQ5 510 aaPredicted RBP5.22□□□□□ -1.57
SNX4-202ENST00000465505 MYLIPQ8WY64 445 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 DIRC2Q96SL1 478 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 PPP1R16BQ96T49 567 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 RSRP1Q9BUV0 290 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 KCNK12Q9HB15 430 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 SP110Q9HB58 689 aa5.22□□□□□ -1.57
SNX4-202ENST00000465505 CHURC1-FNTBB4DL54 471 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 BPNT1O95861 308 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 C1QTNF9P0C862 333 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 YARSP54577 528 aaKnown RBP5.21□□□□□ -1.58
SNX4-202ENST00000465505 TAGLNQ01995 201 aaKnown RBP5.21□□□□□ -1.58
SNX4-202ENST00000465505 DIEXFQ68CQ4 756 aaKnown RBP5.21□□□□□ -1.58
SNX4-202ENST00000465505 TSPYL5Q86VY4 417 aaPredicted RBP5.21□□□□□ -1.58
SNX4-202ENST00000465505 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 RELL1Q8IUW5 271 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 CRELD1Q96HD1 420 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 RHOVQ96L33 236 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 TMEM74Q96NL1 305 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 NSUN3Q9H649 340 aaKnown RBP5.21□□□□□ -1.58
SNX4-202ENST00000465505 GPATCH2Q9NW75 528 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 KCNH3Q9ULD8 1083 aa5.21□□□□□ -1.58
SNX4-202ENST00000465505 SORBS3O60504 671 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 ANKLE2Q86XL3 938 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 RNF141Q8WVD5 230 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 TOX2Q96NM4 488 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 PODXL2Q9NZ53 605 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 REV1Q9UBZ9 1251 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 DUSP13Q9UII6 198 aa5.2□□□□□ -1.58
SNX4-202ENST00000465505 POLR3KQ9Y2Y1 108 aaPredicted RBP5.2□□□□□ -1.58
SNX4-202ENST00000465505 DNAJA2O60884 412 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 ZGLP1P0C6A0 271 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 GARTP22102 1010 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 GBP2P32456 591 aaPredicted RBP5.19□□□□□ -1.58
SNX4-202ENST00000465505 TRHRP34981 398 aaPredicted RBP5.19□□□□□ -1.58
SNX4-202ENST00000465505 EGR3Q06889 387 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 BAHD1Q8TBE0 780 aaPredicted RBP5.19□□□□□ -1.58
SNX4-202ENST00000465505 VWCEQ96DN2 955 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 CCDC74BQ96LY2 380 aa5.19□□□□□ -1.58
SNX4-202ENST00000465505 DCP1AQ9NPI6 582 aaPredicted RBP5.19□□□□□ -1.58
SNX4-202ENST00000465505 RBM47A0AV96 593 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms