RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TDO2P48775 406 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 PDE1AP54750 535 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 FCGRTP55899 365 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 GABPAQ06546 454 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 C12orf60Q5U649 245 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 CTR9Q6PD62 1173 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 RAET1EQ8TD07 263 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 SH3TC2Q8TF17 1288 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
XRN1-204ENST00000465074 SWAP70Q9UH65 585 aa14.62□□□□□ -0.07
XRN1-204ENST00000465074 TRIM6-TRIM34B2RNG4 842 aa14.61□□□□□ -0.07
XRN1-204ENST00000465074 CDK8P49336 464 aa14.61□□□□□ -0.07
XRN1-204ENST00000465074 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
XRN1-204ENST00000465074 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
XRN1-204ENST00000465074 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
XRN1-204ENST00000465074 MYPNQ86TC9 1320 aa14.61□□□□□ -0.07
XRN1-204ENST00000465074 GSG1L2A8MUP6 293 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 TNPO2O14787 897 aaKnown RBP14.6□□□□□ -0.07
XRN1-204ENST00000465074 RAD21O60216 631 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 PEX10O60683 326 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 GNRH1P01148 92 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 AKR1B1P15121 316 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 GCLCP48506 637 aaPredicted RBP14.6□□□□□ -0.07
XRN1-204ENST00000465074 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
XRN1-204ENST00000465074 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 CLEC10AQ8IUN9 316 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 RILPL2Q969X0 211 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 PAGR1Q9BTK6 254 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
XRN1-204ENST00000465074 GNAT2P19087 354 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 GUCY1A2P33402 732 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 USP14P54578 494 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 PRMT2P55345 433 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 PRKCZQ05513 592 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 CCDC129Q6ZRS4 1044 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 TMEM179Q6ZVK1 233 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
XRN1-204ENST00000465074 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 ARPP21Q9UBL0 812 aaPredicted RBP14.59□□□□□ -0.07
XRN1-204ENST00000465074 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 GABRQQ9UN88 632 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
XRN1-204ENST00000465074 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
XRN1-204ENST00000465074 HERVK_113P62684 666 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 ZMYM1Q5SVZ6 1142 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 COA7Q96BR5 231 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 NACAP1Q9BZK3 213 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 KIAA1683Q9H0B3 1180 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
XRN1-204ENST00000465074 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
XRN1-204ENST00000465074 A0A1W2PRG0 241 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 PATL2C9JE40 543 aaKnown RBP14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 RGS19P49795 217 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 NUCB1Q02818 461 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 ICA1Q05084 483 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 ARMC5Q96C12 935 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 CCDC17Q96LX7 622 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 TANGO6Q9C0B7 1094 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 NAPBQ9H115 298 aa14.57□□□□□ -0.08
XRN1-204ENST00000465074 RPAP3Q9H6T3 665 aaPredicted RBP14.57□□□□□ -0.08
XRN1-204ENST00000465074 EPB41L4AQ9HCS5 686 aaPredicted RBP14.57□□□□□ -0.08
XRN1-204ENST00000465074 HTTP42858 3142 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 PRDM1O75626 825 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 ELNP15502 786 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 VCAM1P19320 739 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 GRK4P32298 578 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 FLT3LGP49771 235 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 SBK1Q52WX2 424 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 SPICE1Q8N0Z3 855 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 GPRC5AQ8NFJ5 357 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
XRN1-204ENST00000465074 CENPFP49454 3210 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 ADCY3O60266 1144 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 EEF2P13639 858 aaKnown RBP14.55□□□□□ -0.08
XRN1-204ENST00000465074 EN2P19622 333 aaPredicted RBP14.55□□□□□ -0.08
XRN1-204ENST00000465074 WDR78Q5VTH9 848 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 PLEKHM2Q8IWE5 1019 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 ZNF444Q8N0Y2 327 aaPredicted RBP14.55□□□□□ -0.08
XRN1-204ENST00000465074 FAM227BQ96M60 508 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms