RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.15
APTX-213ENST00000465003 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
APTX-213ENST00000465003 SNAPC2Q13487 334 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 MFSD6Q6ZSS7 791 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 TMEM179Q6ZVK1 233 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 SPICE1Q8N0Z3 855 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
APTX-213ENST00000465003 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 TRPA1O75762 1119 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 SEC24BO95487 1268 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
APTX-213ENST00000465003 GTF2A2P52657 109 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 MOGSQ13724 837 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 CHST3Q7LGC8 479 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 R3HDMLQ9H3Y0 253 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 KCNH4Q9UQ05 1017 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
APTX-213ENST00000465003 A0A0G2JLL6 359 aaPredicted RBP14.07□□□□□ -0.16
APTX-213ENST00000465003 SLC27A2O14975 620 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 KDM4AO75164 1064 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 MAP2K2P36507 400 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
APTX-213ENST00000465003 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 LRRC47Q8N1G4 583 aaKnown RBP14.07□□□□□ -0.16
APTX-213ENST00000465003 IL17RBQ9NRM6 502 aa14.07□□□□□ -0.16
APTX-213ENST00000465003 MYH4Q9Y623 1939 aa14.06□□□□□ -0.16
APTX-213ENST00000465003 BRCA2P51587 3418 aa14.06□□□□□ -0.16
APTX-213ENST00000465003 MANSC4A6NHS7 340 aaPredicted RBP14.06□□□□□ -0.16
APTX-213ENST00000465003 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
APTX-213ENST00000465003 CREB3L3Q68CJ9 461 aa14.06□□□□□ -0.16
APTX-213ENST00000465003 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
APTX-213ENST00000465003 PEX10O60683 326 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
APTX-213ENST00000465003 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
APTX-213ENST00000465003 BACE1P56817 501 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 NECTIN1Q15223 517 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
APTX-213ENST00000465003 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 AS3MTQ9HBK9 375 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 HTTP42858 3142 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 E7EWF7 191 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 ORC4O43929 436 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 FGRP09769 529 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 CYP2C8P10632 490 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 CETPP11597 493 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 C8orf34Q49A92 452 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 RNF186Q9NXI6 227 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
APTX-213ENST00000465003 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 TM4SF4P48230 202 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
APTX-213ENST00000465003 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 WBP1LQ9NX94 342 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 ZSWIM5Q9P217 1185 aa14.04□□□□□ -0.16
APTX-213ENST00000465003 PDHXO00330 501 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 CXCL11O14625 94 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 FOXN1O15353 648 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
APTX-213ENST00000465003 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 MTMR4Q9NYA4 1195 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 CPA1P15085 419 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 VCAM1P19320 739 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 MAP2K1Q02750 393 aaPredicted RBP14.03□□□□□ -0.16
APTX-213ENST00000465003 CRHR2Q13324 411 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 ESR2Q92731 530 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 BEGAINQ9BUH8 593 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 ARHGEF10LQ9HCE6 1279 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
APTX-213ENST00000465003 PLIN4Q96Q06 1357 aa14.03□□□□□ -0.16
APTX-213ENST00000465003 TESPA1A2RU30 521 aaPredicted RBP14.02□□□□□ -0.16
APTX-213ENST00000465003 REC8O95072 547 aa14.02□□□□□ -0.16
APTX-213ENST00000465003 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.16
APTX-213ENST00000465003 SENP2Q9HC62 589 aa14.02□□□□□ -0.16
APTX-213ENST00000465003 TTLL1O95922 423 aa14.02□□□□□ -0.17
APTX-213ENST00000465003 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.17
APTX-213ENST00000465003 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
APTX-213ENST00000465003 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
APTX-213ENST00000465003 ANTXR2P58335 489 aa14.01□□□□□ -0.17
APTX-213ENST00000465003 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms