RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 N4BP3O15049 544 aa14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 MBD4O95243 580 aa14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 PACS2Q86VP3 889 aa14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 GSPT2Q8IYD1 628 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 NAPBQ9H115 298 aa14.27□□□□□ -0.13
CLCNKA-204ENST00000464764 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 KRT31Q15323 416 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 TRIML1Q8N9V2 468 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 CNNM1Q9NRU3 951 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ITGA6P23229 1130 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 TRIM22Q8IYM9 498 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 MAGEB6Q8N7X4 407 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 CAPZA3Q96KX2 299 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ISCA1Q9BUE6 129 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 NAA15Q9BXJ9 866 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 FOXP1Q9H334 677 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 RABEP2Q9H5N1 569 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 MYO6Q9UM54 1294 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 SCN11AQ9UI33 1791 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 TCRBV5S4A2TA0A5A2 114 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 LIFRP42702 1097 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ZNF174Q15697 407 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 ABHD10Q9NUJ1 306 aa14.26□□□□□ -0.13
CLCNKA-204ENST00000464764 SLIT3O75094 1523 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 REXO2Q9Y3B8 237 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 RNF40O75150 1001 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 SYF2O95926 243 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 KRT9P35527 623 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 AMPD2Q01433 879 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 MMS19Q96T76 1030 aa14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 PHRF1Q9P1Y6 1649 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-204ENST00000464764 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 KANK3Q6NY19 840 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 TTF2Q9UNY4 1162 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 IVLP07476 585 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 WTAPQ15007 396 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 RRAGBQ5VZM2 374 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 STK36Q9NRP7 1315 aa14.24□□□□□ -0.13
CLCNKA-204ENST00000464764 GSG1L2A8MUP6 293 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 PATL2C9JE40 543 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 MRPS25P82663 173 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 MIGA1Q8NAN2 632 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 FAM71BQ8TC56 605 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 WASF1Q92558 559 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 CSF1RP07333 972 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 HLFQ16534 295 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 WHAMMP3Q1A5X7 153 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 FANCBQ8NB91 859 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 TBC1D2BQ9UPU7 963 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 PES1O00541 588 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 DEXIO95424 95 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 MYBL2P10244 700 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 MTRQ99707 1265 aa14.23□□□□□ -0.13
CLCNKA-204ENST00000464764 EHD4Q9H223 541 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 ZNF185O15231 689 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 TDO2P48775 406 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 COPB1P53618 953 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 CYP26C1Q6V0L0 522 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 CTAGE1Q96RT6 745 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 EPN1Q9Y6I3 576 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 MYO5AQ9Y4I1 1855 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 XDHP47989 1333 aa14.22□□□□□ -0.13
CLCNKA-204ENST00000464764 ADAMTS3O15072 1205 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 UBXN1Q04323 297 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 ZNF654Q8IZM8 581 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 GDAQ9Y2T3 454 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 TRIM49BA6NDI0 452 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 CCDC148Q8NFR7 591 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 CEP131Q9UPN4 1083 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 DUSP10Q9Y6W6 482 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 V9GY48 417 aaPredicted RBP14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 MST1RQ04912 1400 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms