RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 BUB1BO60566 1050 aaPredicted RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 PPP1R37O75864 691 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 SASH1O94885 1247 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 LUC7L3O95232 432 aaKnown RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 NDUFA10O95299 355 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 CTDNEP1O95476 244 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 CCDC38Q502W7 563 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 C8orf74Q6P047 294 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 CACNA2D4Q7Z3S7 1137 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 MAATS1Q7Z4T9 603 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 CPLX4Q7Z7G2 160 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 TXNDC2Q86VQ3 553 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 ZNF579Q8NAF0 562 aaKnown RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 ZKSCAN4Q969J2 545 aaPredicted RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 SGSM3Q96HU1 749 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.34□□□□□ -1.721e-13■□□□□ 8.4
CCNL1-204ENST00000464316 VCPKMTQ9H867 229 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 SAMSN1Q9NSI8 373 aaKnown RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 TBC1D2BQ9UPU7 963 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 DLC1Q96QB1 1528 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 RREB1Q92766 1687 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 RGPD1P0DJD0 1748 aa4.34□□□□□ -1.72
CCNL1-204ENST00000464316 CFAP65Q6ZU64 1925 aaKnown RBP4.34□□□□□ -1.72
CCNL1-204ENST00000464316 PTPRMP28827 1452 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ERICH2A1L162 156 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 IFIT1P09914 478 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 IBSPP21815 317 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 NAP1L1P55209 391 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 RWDD2BP57060 319 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 UBXN1Q04323 297 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ITIH3Q06033 890 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MORC3Q14149 939 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MTF1Q14872 753 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 TNNI3KQ59H18 835 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 GKAP1Q5VSY0 366 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 PAPD7Q5XG87 772 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 PPP4R3AQ6IN85 833 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 GIGYF2Q6Y7W6 1299 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 DDX46Q7L014 1031 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 TRAPPC11Q7Z392 1133 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 EGFL6Q8IUX8 553 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 DHX37Q8IY37 1157 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 TRMT44Q8IYL2 757 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 CCDC170Q8IYT3 715 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 RETREG2Q8NC44 543 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 KAT2BQ92831 832 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 GDAP1L1Q96MZ0 367 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ATP6V0A4Q9HBG4 840 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 COPRSQ9NQ92 184 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 PAG1Q9NWQ8 432 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MCM8Q9UJA3 840 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 FPGT-TNNI3KV9GXZ4 949 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 NPHP4O75161 1426 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 KDRP35968 1356 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 WDR19Q8NEZ3 1342 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ZBTB43O43298 467 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 FAM107AO95990 144 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 NR1D1P20393 614 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 KIF5BP33176 963 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 PDCLQ13371 301 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 TTF1Q15361 905 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 FKBP15Q5T1M5 1219 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 FAM114A1Q8IWE2 563 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MMGT1Q8N4V1 131 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 IL17REQ8NFR9 667 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 AIDAQ96BJ3 306 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 CCDC42Q96M95 316 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SEC62Q99442 399 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SH3GL2Q99962 352 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 RABEP2Q9H5N1 569 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 INCENPQ9NQS7 918 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 HOMER3Q9NSC5 361 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ADD3Q9UEY8 706 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SERTAD1Q9UHV2 236 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ZMYM6O95789 1325 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 ACEP12821 1306 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 IGSF1Q8N6C5 1336 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SALL1Q9NSC2 1324 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 H7C1D1 291 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 GCOM1H8Y6P7 765 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MYO1FO00160 1098 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MPHOSPH10O00566 681 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 PRR29P0C7W0 189 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 MYZAPP0CAP1 466 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 HSPD1P10809 573 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 SCP2P22307 547 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 LSP1P33241 339 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 STX17P56962 302 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
CCNL1-204ENST00000464316 CFAP221Q4G0U5 840 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 RRAGBQ5VZM2 374 aa4.33□□□□□ -1.72
CCNL1-204ENST00000464316 KDM7AQ6ZMT4 941 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms