RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 POTEEQ6S8J3 1075 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 CCDC129Q6ZRS4 1044 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 STK11IPQ8N1F8 1099 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
XRN1-203ENST00000463916 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 FOXP2O15409 715 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 FMNL1O95466 1100 aaPredicted RBP15.55■□□□□ 0.08
XRN1-203ENST00000463916 OSBPP22059 807 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 ARHGEF6Q15052 776 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 LRRFIP1Q32MZ4 808 aaKnown RBP15.55■□□□□ 0.08
XRN1-203ENST00000463916 SBK1Q52WX2 424 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 KIAA1683Q9H0B3 1180 aa15.55■□□□□ 0.08
XRN1-203ENST00000463916 ARPP21Q9UBL0 812 aaPredicted RBP15.55■□□□□ 0.08
XRN1-203ENST00000463916 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
XRN1-203ENST00000463916 APPP05067 770 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 RGS19P49795 217 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
XRN1-203ENST00000463916 AMOTL1Q8IY63 956 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 IFNL3Q8IZI9 196 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 FEZ1Q99689 392 aa15.54■□□□□ 0.08
XRN1-203ENST00000463916 GNAT2P19087 354 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 TMEM179Q6ZVK1 233 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 GNRH1P01148 92 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 KIAA1755Q5JYT7 1200 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 FAM227BQ96M60 508 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.53■□□□□ 0.08
XRN1-203ENST00000463916 OSBPL3Q9H4L5 887 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 TXNRD2Q9NNW7 524 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 SRRDQ9UH36 339 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 TAOK2Q9UL54 1235 aa15.53■□□□□ 0.08
XRN1-203ENST00000463916 MYH8P13535 1937 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 VCAM1P19320 739 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 TDO2P48775 406 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 HERVK_113P62684 666 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 IRX3P78415 501 aaPredicted RBP15.52■□□□□ 0.08
XRN1-203ENST00000463916 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 VPS53Q5VIR6 699 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 ARMC5Q96C12 935 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 CCDC17Q96LX7 622 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 GABRQQ9UN88 632 aa15.52■□□□□ 0.08
XRN1-203ENST00000463916 MGAMO43451 1857 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 A0A0D9SFI3 127 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 PDE4AP27815 886 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 GCLCP48506 637 aaPredicted RBP15.52■□□□□ 0.07
XRN1-203ENST00000463916 FCGRTP55899 365 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 PRKCZQ05513 592 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 SH3TC2Q8TF17 1288 aa15.52■□□□□ 0.07
XRN1-203ENST00000463916 RASA1P20936 1047 aa15.51■□□□□ 0.07
XRN1-203ENST00000463916 USP14P54578 494 aa15.51■□□□□ 0.07
XRN1-203ENST00000463916 SLC9C1Q4G0N8 1177 aa15.51■□□□□ 0.07
XRN1-203ENST00000463916 RILPL2Q969X0 211 aa15.51■□□□□ 0.07
XRN1-203ENST00000463916 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
XRN1-203ENST00000463916 ROBO3Q96MS0 1386 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 MYPNQ86TC9 1320 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 Q3C1V9 767 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 MORF4L1Q9UBU8 362 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 DOCK3Q8IZD9 2030 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 PRDM1O75626 825 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 MYCP01106 439 aaPredicted RBP15.5■□□□□ 0.07
XRN1-203ENST00000463916 ICA1Q05084 483 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 ZNF333Q96JL9 665 aa15.5■□□□□ 0.07
XRN1-203ENST00000463916 RPAP3Q9H6T3 665 aaPredicted RBP15.5■□□□□ 0.07
XRN1-203ENST00000463916 POTEFA5A3E0 1075 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L15C9J2P7 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L13C9JLJ4 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L11C9JVI0 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L18D6R9N7 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L22D6RA61 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L17D6RBQ6 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L19D6RCP7 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L20D6RJB6 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 TNPO2O14787 897 aaKnown RBP15.49■□□□□ 0.07
XRN1-203ENST00000463916 EEF2P13639 858 aaKnown RBP15.49■□□□□ 0.07
XRN1-203ENST00000463916 HOXD10P28358 340 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 PRMT2P55345 433 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 USP17L24Q0WX57 530 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 NMIQ13287 307 aaPredicted RBP15.49■□□□□ 0.07
XRN1-203ENST00000463916 ZNF589Q86UQ0 364 aaPredicted RBP15.49■□□□□ 0.07
XRN1-203ENST00000463916 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 MKNK2Q9HBH9 465 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 HELLSQ9NRZ9 838 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 TMX2Q9Y320 296 aa15.49■□□□□ 0.07
XRN1-203ENST00000463916 FLT3LGP49771 235 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 SPICE1Q8N0Z3 855 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 NAPBQ9H115 298 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 INCENPQ9NQS7 918 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 KANSL2Q9H9L4 492 aa15.48■□□□□ 0.07
XRN1-203ENST00000463916 CNMDO75829 334 aa15.47■□□□□ 0.07
XRN1-203ENST00000463916 SDSP20132 328 aa15.47■□□□□ 0.07
XRN1-203ENST00000463916 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
XRN1-203ENST00000463916 PPARAQ07869 468 aa15.47■□□□□ 0.07
XRN1-203ENST00000463916 NBPF11Q86T75 865 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms