RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 DNAH12Q6ZR08 3092 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L15C9J2P7 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L13C9JLJ4 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L11C9JVI0 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L18D6R9N7 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L22D6RA61 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L17D6RBQ6 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L19D6RCP7 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L20D6RJB6 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 CNMDO75829 334 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 CCND3P30281 292 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP14P54578 494 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 USP17L24Q0WX57 530 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 MAP2K5Q13163 448 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 FEZ1Q99689 392 aa21.1■□□□□ 0.97
HMGN1-209ENST00000463631 TLR7Q9NYK1 1049 aaKnown RBP21.1■□□□□ 0.97
HMGN1-209ENST00000463631 DLL1O00548 723 aa21.09■□□□□ 0.97
HMGN1-209ENST00000463631 IDH1O75874 414 aaKnown RBP21.09■□□□□ 0.97
HMGN1-209ENST00000463631 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
HMGN1-209ENST00000463631 DEFB123Q8N688 67 aa21.09■□□□□ 0.97
HMGN1-209ENST00000463631 EAF2Q96CJ1 260 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-209ENST00000463631 UBE2OQ9C0C9 1292 aaKnown RBP21.09■□□□□ 0.97
HMGN1-209ENST00000463631 NAV1Q8NEY1 1877 aa21.09■□□□□ 0.97
HMGN1-209ENST00000463631 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
HMGN1-209ENST00000463631 HOXC6P09630 235 aa21.08■□□□□ 0.97
HMGN1-209ENST00000463631 VCAM1P19320 739 aa21.08■□□□□ 0.97
HMGN1-209ENST00000463631 CATSPERGQ6ZRH7 1159 aa21.08■□□□□ 0.97
HMGN1-209ENST00000463631 MIGA1Q8NAN2 632 aa21.08■□□□□ 0.97
HMGN1-209ENST00000463631 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
HMGN1-209ENST00000463631 USP5P45974 858 aa21.07■□□□□ 0.96
HMGN1-209ENST00000463631 LRRC26Q2I0M4 334 aa21.07■□□□□ 0.96
HMGN1-209ENST00000463631 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
HMGN1-209ENST00000463631 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
HMGN1-209ENST00000463631 EDC3Q96F86 508 aaKnown RBP21.07■□□□□ 0.96
HMGN1-209ENST00000463631 CWC22Q9HCG8 908 aaKnown RBP21.07■□□□□ 0.96
HMGN1-209ENST00000463631 MSCO60682 206 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 PTPREP23469 700 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 GRB14Q14449 540 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 ZYXQ15942 572 aaKnown RBP21.06■□□□□ 0.96
HMGN1-209ENST00000463631 ABCB5Q2M3G0 1257 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 CERKLQ49MI3 558 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-209ENST00000463631 MFSD14CQ5VZR4 134 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 C1orf115Q9H7X2 142 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 STXBP5LQ9Y2K9 1186 aa21.06■□□□□ 0.96
HMGN1-209ENST00000463631 LAMA2P24043 3122 aaKnown RBP21.05■□□□□ 0.96
HMGN1-209ENST00000463631 IGHA2P01877 340 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 SHMT1P34896 483 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 RAB3GAP1Q15042 981 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-209ENST00000463631 MTMR10Q9NXD2 777 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
HMGN1-209ENST00000463631 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-209ENST00000463631 Q7L0L9 218 aa21.04■□□□□ 0.96
HMGN1-209ENST00000463631 ACER1Q8TDN7 264 aa21.04■□□□□ 0.96
HMGN1-209ENST00000463631 RIOK1Q9BRS2 568 aaKnown RBP21.04■□□□□ 0.96
HMGN1-209ENST00000463631 BTBD7Q9P203 1132 aa21.04■□□□□ 0.96
HMGN1-209ENST00000463631 IVNS1ABPQ9Y6Y0 642 aa21.04■□□□□ 0.96
HMGN1-209ENST00000463631 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
HMGN1-209ENST00000463631 LPAR1Q92633 364 aa21.03■□□□□ 0.96
HMGN1-209ENST00000463631 ANTXR1Q9H6X2 564 aa21.03■□□□□ 0.96
HMGN1-209ENST00000463631 CABP5Q9NP86 173 aa21.03■□□□□ 0.96
HMGN1-209ENST00000463631 DDX20Q9UHI6 824 aaKnown RBP21.03■□□□□ 0.96
HMGN1-209ENST00000463631 RLFQ13129 1914 aa21.03■□□□□ 0.96
HMGN1-209ENST00000463631 LTBP2Q14767 1821 aa21.03■□□□□ 0.96
HMGN1-209ENST00000463631 GUCY1A2P33402 732 aa21.02■□□□□ 0.96
HMGN1-209ENST00000463631 GABPAQ06546 454 aa21.02■□□□□ 0.96
HMGN1-209ENST00000463631 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.96
HMGN1-209ENST00000463631 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-209ENST00000463631 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
HMGN1-209ENST00000463631 UNC80Q8N2C7 3258 aa21.02■□□□□ 0.96
HMGN1-209ENST00000463631 DNM1LO00429 736 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 RLBP1P12271 317 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 CYBAP13498 195 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 PLCD1P51178 756 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 WDR78Q5VTH9 848 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 ITPRIPQ8IWB1 547 aa21.01■□□□□ 0.95
HMGN1-209ENST00000463631 MDM2Q00987 491 aaPredicted RBP21■□□□□ 0.95
HMGN1-209ENST00000463631 ATP2B2Q01814 1243 aa21■□□□□ 0.95
HMGN1-209ENST00000463631 SEPT2Q15019 361 aa20.99■□□□□ 0.95
HMGN1-209ENST00000463631 TTF1Q15361 905 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-209ENST00000463631 OLFML2BQ68BL8 750 aa20.99■□□□□ 0.95
HMGN1-209ENST00000463631 FAM109BQ6ICB4 259 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-209ENST00000463631 AACSQ86V21 672 aa20.99■□□□□ 0.95
HMGN1-209ENST00000463631 SHCBP1Q8NEM2 672 aa20.99■□□□□ 0.95
HMGN1-209ENST00000463631 NPLOC4Q8TAT6 608 aa20.99■□□□□ 0.95
HMGN1-209ENST00000463631 SENP6Q9GZR1 1112 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-209ENST00000463631 MYH8P13535 1937 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 MAGEB6P1A0A0J9YX57 407 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 STRNO43815 780 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 CYP2C19P33261 490 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 COG2Q14746 738 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 TRPV1Q8NER1 839 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 LBHD1Q9BQE6 289 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-209ENST00000463631 MOV10L1Q9BXT6 1211 aaKnown RBP20.98■□□□□ 0.95
HMGN1-209ENST00000463631 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
HMGN1-209ENST00000463631 PARP14Q460N5 1801 aa20.98■□□□□ 0.95
HMGN1-209ENST00000463631 A0A1W2PRG0 241 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms