RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 RBM43Q6ZSC3 357 aaKnown RBP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 LEO1Q8WVC0 666 aaPredicted RBP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 AATFQ9NY61 560 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 CFAP45Q9UL16 551 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 ZMYM6O95789 1325 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 JAK2O60674 1132 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 FGD1P98174 961 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 PICALMQ13492 652 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 UBE3CQ15386 1083 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.53□□□□□ -0.56
PTPRD-207ENST00000463477 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 TEX11Q8IYF3 940 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
PTPRD-207ENST00000463477 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 CSRNP1Q96S65 589 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
PTPRD-207ENST00000463477 DDTLA6NHG4 134 aaPredicted RBP11.52□□□□□ -0.56
PTPRD-207ENST00000463477 CTDNEP1O95476 244 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.56
PTPRD-207ENST00000463477 ADD2P35612 726 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 SPRYD7Q5W111 196 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 BEGAINQ9BUH8 593 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 ZNF341Q9BYN7 854 aa11.52□□□□□ -0.56
PTPRD-207ENST00000463477 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.56
PTPRD-207ENST00000463477 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 H3BQV1 296 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 CA12O43570 354 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 TBC1D12O60347 775 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 FGAP02671 866 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 CCDC192P0DO97 292 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 PDE6AP16499 860 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 PDIA3P30101 505 aaKnown RBP11.52□□□□□ -0.57
PTPRD-207ENST00000463477 TM4SF4P48230 202 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 INHBEP58166 350 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 FERMT3Q86UX7 667 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 ZSCAN29Q8IWY8 852 aaPredicted RBP11.52□□□□□ -0.57
PTPRD-207ENST00000463477 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.57
PTPRD-207ENST00000463477 RNF214Q8ND24 703 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
PTPRD-207ENST00000463477 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
PTPRD-207ENST00000463477 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 FOXN1O15353 648 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
PTPRD-207ENST00000463477 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 VGLL4Q14135 290 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 ALX1Q15699 326 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 SLFNL1Q499Z3 407 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 MIGA1Q8NAN2 632 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 TGFBRAP1Q8WUH2 860 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 RIOK1Q9BRS2 568 aaKnown RBP11.51□□□□□ -0.57
PTPRD-207ENST00000463477 NUP62CLQ9H1M0 184 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
PTPRD-207ENST00000463477 CSADQ9Y600 493 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
PTPRD-207ENST00000463477 THSD7BQ9C0I4 1608 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 PHF20L1A8MW92 1017 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 GPAA1O43292 621 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
PTPRD-207ENST00000463477 CAVIN2O95810 425 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
PTPRD-207ENST00000463477 TERF1P54274 439 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 ZKSCAN4Q969J2 545 aaPredicted RBP11.5□□□□□ -0.57
PTPRD-207ENST00000463477 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 PUS7LQ9H0K6 701 aaKnown RBP11.5□□□□□ -0.57
PTPRD-207ENST00000463477 CLSTN2Q9H4D0 955 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 RCOR1Q9UKL0 485 aa11.5□□□□□ -0.57
PTPRD-207ENST00000463477 COL2A1P02458 1487 aaPredicted RBP11.5□□□□□ -0.57
PTPRD-207ENST00000463477 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 KDM4AO75164 1064 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 OFD1O75665 1012 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 LIG1P18858 919 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 GIMAP6Q6P9H5 292 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 ERO1BQ86YB8 467 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 FOXP4Q8IVH2 680 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 ZNF396Q96N95 335 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 ZNF213O14771 459 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 INPP5BP32019 993 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 GJA5P36382 358 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms