RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 C16orf86Q6ZW13 317 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 EMILIN3Q9NT22 766 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 SRRDQ9UH36 339 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 APPP05067 770 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 CTGFP29279 349 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
COL1A1-202ENST00000463440 SLC9C1Q4G0N8 1177 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 ZMYM1Q5SVZ6 1142 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 NBPF11Q86T75 865 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 C12orf42Q96LP6 360 aa19.44■□□□□ 0.7
COL1A1-202ENST00000463440 MYH8P13535 1937 aa19.43■□□□□ 0.7
COL1A1-202ENST00000463440 TDO2P48775 406 aa19.43■□□□□ 0.7
COL1A1-202ENST00000463440 ACER1Q8TDN7 264 aa19.43■□□□□ 0.7
COL1A1-202ENST00000463440 ARMC5Q96C12 935 aa19.43■□□□□ 0.7
COL1A1-202ENST00000463440 NACAP1Q9BZK3 213 aa19.43■□□□□ 0.7
COL1A1-202ENST00000463440 MINDY4BA8MYZ0 360 aa19.42■□□□□ 0.7
COL1A1-202ENST00000463440 PATL2C9JE40 543 aaKnown RBP19.42■□□□□ 0.7
COL1A1-202ENST00000463440 AKR1B1P15121 316 aa19.42■□□□□ 0.7
COL1A1-202ENST00000463440 IRX6P78412 446 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-202ENST00000463440 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
COL1A1-202ENST00000463440 GTF3C2Q8WUA4 911 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-202ENST00000463440 SEC62Q99442 399 aaKnown RBP19.42■□□□□ 0.7
COL1A1-202ENST00000463440 P2RX7Q99572 595 aaKnown RBP19.42■□□□□ 0.7
COL1A1-202ENST00000463440 MYPNQ86TC9 1320 aa19.42■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 SMIM22K7EJ46 135 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 TNPO2O14787 897 aaKnown RBP19.41■□□□□ 0.7
COL1A1-202ENST00000463440 HERVK_113P62684 666 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 MLLT1Q03111 559 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-202ENST00000463440 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 RAET1EQ8TD07 263 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
COL1A1-202ENST00000463440 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-202ENST00000463440 MGAMO43451 1857 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 TRIM6-TRIM34B2RNG4 842 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 VCAM1P19320 739 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 ICA1Q05084 483 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 IFNL3Q8IZI9 196 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 COA7Q96BR5 231 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 SH2D4AQ9H788 454 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 MKNK2Q9HBH9 465 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 MORF4L1Q9UBU8 362 aa19.4■□□□□ 0.7
COL1A1-202ENST00000463440 A0A1W2PRG0 241 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 PRKCZQ05513 592 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 ZNF333Q96JL9 665 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 NAPBQ9H115 298 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 OSBPL3Q9H4L5 887 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 HELLSQ9NRZ9 838 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 ROBO3Q96MS0 1386 aa19.39■□□□□ 0.69
COL1A1-202ENST00000463440 CATSPERGQ6ZRH7 1159 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 GPRC5AQ8NFJ5 357 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 RILPL2Q969X0 211 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 HTTP42858 3142 aa19.38■□□□□ 0.69
COL1A1-202ENST00000463440 GRK4P32298 578 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 CCDC129Q6ZRS4 1044 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 SH3TC2Q8TF17 1288 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 TMEM106CQ9BVX2 250 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
COL1A1-202ENST00000463440 GABRQQ9UN88 632 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 TMX2Q9Y320 296 aa19.37■□□□□ 0.69
COL1A1-202ENST00000463440 SLC3A2P08195 630 aaKnown RBP19.36■□□□□ 0.69
COL1A1-202ENST00000463440 RASA1P20936 1047 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 FLT3LGP49771 235 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 CLEC10AQ8IUN9 316 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 LPAR1Q92633 364 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 PAGR1Q9BTK6 254 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 TXNRD2Q9NNW7 524 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 RBPJLQ9UBG7 517 aa19.36■□□□□ 0.69
COL1A1-202ENST00000463440 ERVK-9P63128 1117 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 ERVK-24P63145 666 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 ATP2B2Q01814 1243 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 MCMDC2Q4G0Z9 681 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 SIAH1Q8IUQ4 282 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 CCAR1Q8IX12 1150 aaKnown RBP19.35■□□□□ 0.69
COL1A1-202ENST00000463440 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-202ENST00000463440 SLAIN1Q8ND83 568 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 BIN2Q9UBW5 565 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-202ENST00000463440 RABGAP1Q9Y3P9 1069 aa19.35■□□□□ 0.69
COL1A1-202ENST00000463440 EEF2P13639 858 aaKnown RBP19.34■□□□□ 0.69
COL1A1-202ENST00000463440 PDE4BQ07343 736 aa19.34■□□□□ 0.69
COL1A1-202ENST00000463440 PPARAQ07869 468 aa19.34■□□□□ 0.69
COL1A1-202ENST00000463440 IRF5Q13568 498 aa19.34■□□□□ 0.69
COL1A1-202ENST00000463440 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
COL1A1-202ENST00000463440 TANGO6Q9C0B7 1094 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms