RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZKSCAN1P17029 563 aaPredicted RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 ADORA1P30542 326 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 HERVK_113P62684 666 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 JAG1P78504 1218 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 Q3C1V9 767 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 CCDC102BQ68D86 513 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 GPR142Q7Z601 462 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 METTL16Q86W50 562 aaKnown RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 ZGPATQ8N5A5 531 aaKnown RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.874e-6■■□□□ 13.3
SMC3-202ENST00000462899 P2RX7Q99572 595 aaKnown RBP9.61□□□□□ -0.87
SMC3-202ENST00000462899 APBA2Q99767 749 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 DNAJC18Q9H819 358 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMC3-202ENST00000462899 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
SMC3-202ENST00000462899 PTPRCP08575 1304 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 MAP4K4O95819 1239 aaPredicted RBP9.6□□□□□ -0.87
SMC3-202ENST00000462899 MAPK4P31152 587 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 RGS2P41220 211 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 BACE1P56817 501 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 ERVK-9P63128 1117 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 ERVK-24P63145 666 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 SMAD3P84022 425 aaKnown RBP9.6□□□□□ -0.87
SMC3-202ENST00000462899 MECOMQ03112 1051 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 MTMR2Q13614 643 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 SNX17Q15036 470 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 C9orf50Q5SZB4 431 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 GPRC5AQ8NFJ5 357 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
SMC3-202ENST00000462899 GNL3LQ9NVN8 582 aaKnown RBP9.6□□□□□ -0.87
SMC3-202ENST00000462899 GBF1Q92538 1859 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 PLXNA1Q9UIW2 1896 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 ZNF521Q96K83 1311 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 CNMDO75829 334 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 HOXC6P09630 235 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 SHHQ15465 462 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 SHROOM1Q2M3G4 852 aaPredicted RBP9.59□□□□□ -0.87
SMC3-202ENST00000462899 DZIP1Q86YF9 867 aaKnown RBP9.59□□□□□ -0.87
SMC3-202ENST00000462899 SLF2Q8IX21 1173 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 LPAR1Q92633 364 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 NSUN4Q96CB9 384 aaKnown RBP9.59□□□□□ -0.87
SMC3-202ENST00000462899 SENP6Q9GZR1 1112 aaPredicted RBP9.59□□□□□ -0.87
SMC3-202ENST00000462899 WDR70Q9NW82 654 aa9.59□□□□□ -0.87
SMC3-202ENST00000462899 HERC5Q9UII4 1024 aaKnown RBP9.59□□□□□ -0.87
SMC3-202ENST00000462899 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 DNM1LO00429 736 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 COL9A1P20849 921 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 IL15P40933 162 aaPredicted RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 RTP1P59025 263 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 IRX3P78415 501 aaPredicted RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 PLEKHH3Q7Z736 793 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 USP38Q8NB14 1042 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 TRPV1Q8NER1 839 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 GTF3C2Q8WUA4 911 aaPredicted RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 LBHD1Q9BQE6 289 aaPredicted RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 SIL1Q9H173 461 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 AS3MTQ9HBK9 375 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 CEP126Q9P2H0 1117 aa9.58□□□□□ -0.88
SMC3-202ENST00000462899 DDX20Q9UHI6 824 aaKnown RBP9.58□□□□□ -0.88
SMC3-202ENST00000462899 COL11A1P12107 1806 aaPredicted RBP9.57□□□□□ -0.88
SMC3-202ENST00000462899 C19orf81C9J6K1 198 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 ASNSP08243 561 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 CYBAP13498 195 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 GRB14Q14449 540 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 LBX2Q6XYB7 198 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 C12orf42Q96LP6 360 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 PDLIM7Q9NR12 457 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 ABCF2Q9UG63 623 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
SMC3-202ENST00000462899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.57□□□□□ -0.88
SMC3-202ENST00000462899 MSCO60682 206 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 FOSL2P15408 326 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 TJAP1Q5JTD0 557 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 SPTY2D1Q68D10 685 aaPredicted RBP9.56□□□□□ -0.88
SMC3-202ENST00000462899 PI16Q6UXB8 463 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 RAPGEFL1Q9UHV5 662 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 PA2G4Q9UQ80 394 aaKnown RBP9.56□□□□□ -0.88
SMC3-202ENST00000462899 RABGAP1Q9Y3P9 1069 aa9.56□□□□□ -0.88
SMC3-202ENST00000462899 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
SMC3-202ENST00000462899 MYH8P13535 1937 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 A0A1B0GUL7 405 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 TRIM43BA6NCK2 446 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 SLC15A5A6NIM6 579 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 TNFRSF10AO00220 468 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 PTPREP23469 700 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 ITGB8P26012 769 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
SMC3-202ENST00000462899 TIMM10P62072 90 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms