RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 RBPJLQ9UBG7 517 aa18.31■□□□□ 0.52
COL16A1-206ENST00000461217 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 PDE6AP16499 860 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
COL16A1-206ENST00000461217 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
COL16A1-206ENST00000461217 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
COL16A1-206ENST00000461217 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 DOCK3Q8IZD9 2030 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
COL16A1-206ENST00000461217 SHMT1P34896 483 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 PLCD1P51178 756 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 WDR78Q5VTH9 848 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
COL16A1-206ENST00000461217 C12orf42Q96LP6 360 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 PORCNQ9H237 461 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
COL16A1-206ENST00000461217 MCM9Q9NXL9 1143 aa18.29■□□□□ 0.52
COL16A1-206ENST00000461217 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
COL16A1-206ENST00000461217 RGS2P41220 211 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 CCNA1P78396 465 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 Q3C1V9 767 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 TRMT44Q8IYL2 757 aaKnown RBP18.28■□□□□ 0.52
COL16A1-206ENST00000461217 ANKLE1Q8NAG6 615 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL16A1-206ENST00000461217 KIAA1683Q9H0B3 1180 aa18.28■□□□□ 0.52
COL16A1-206ENST00000461217 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
COL16A1-206ENST00000461217 VCAM1P19320 739 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
COL16A1-206ENST00000461217 ZBTB40Q9NUA8 1239 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 RABGAP1Q9Y3P9 1069 aa18.27■□□□□ 0.52
COL16A1-206ENST00000461217 GLRX3O76003 335 aaKnown RBP18.26■□□□□ 0.51
COL16A1-206ENST00000461217 SEPT2Q15019 361 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 SIRT2Q8IXJ6 389 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 APBA2Q99767 749 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-206ENST00000461217 ARMT1Q9H993 441 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
COL16A1-206ENST00000461217 CCL14Q16627 93 aa18.25■□□□□ 0.51
COL16A1-206ENST00000461217 C7orf61Q8IZ16 206 aa18.25■□□□□ 0.51
COL16A1-206ENST00000461217 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL16A1-206ENST00000461217 BOLA2Q9H3K6 86 aa18.25■□□□□ 0.51
COL16A1-206ENST00000461217 C11orf49Q9H6J7 331 aa18.25■□□□□ 0.51
COL16A1-206ENST00000461217 DCP1AQ9NPI6 582 aaPredicted RBP18.25■□□□□ 0.51
COL16A1-206ENST00000461217 IVNS1ABPQ9Y6Y0 642 aa18.25■□□□□ 0.51
COL16A1-206ENST00000461217 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 CNMDO75829 334 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 MBD4O95243 580 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 EVX2Q03828 476 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 GABPAQ06546 454 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-206ENST00000461217 MORN1Q5T089 497 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 MAP3K21Q5TCX8 1036 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
COL16A1-206ENST00000461217 CYP2D6P10635 497 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 MAP2K5Q13163 448 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 USP6NLQ92738 828 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 SWAP70Q9UH65 585 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 OGDHLQ9ULD0 1010 aa18.23■□□□□ 0.51
COL16A1-206ENST00000461217 SPDYE16A6NNV3 312 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-206ENST00000461217 ATP5JP18859 108 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 CCND3P30281 292 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-206ENST00000461217 ADD2P35612 726 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-206ENST00000461217 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 BTBD7Q9P203 1132 aa18.22■□□□□ 0.51
COL16A1-206ENST00000461217 ALPK3Q96L96 1907 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 PRKAB2O43741 272 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 SLFNL1Q499Z3 407 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 MFSD14CQ5VZR4 134 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 LBX2Q6XYB7 198 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 HAUS7Q99871 368 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
COL16A1-206ENST00000461217 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms