RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 TPP2P29144 1249 aaPredicted RBP6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 CDK8P49336 464 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 CHMP4BP1P59074 171 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 TSNAXIP1Q2TAA8 658 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 CIAPIN1Q6FI81 312 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 SIAH1Q8IUQ4 282 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 TMEM87BQ96K49 555 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 PCDHB5Q9Y5E4 795 aa6.15□□□□□ -1.42
SPTLC1-203ENST00000461132 CNTNAP4Q9C0A0 1308 aa6.15□□□□□ -1.43
SPTLC1-203ENST00000461132 BPNT1O95861 308 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 LIG3P49916 1009 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 JARID2Q92833 1246 aaPredicted RBP6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 KCNN1Q92952 543 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 SLC26A8Q96RN1 970 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 TJP2Q9UDY2 1190 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 DUSP13Q9UII6 198 aa6.14□□□□□ -1.43
SPTLC1-203ENST00000461132 DNAJC25-GNG10A0A024R161 153 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 NPIPB6E9PJ23 425 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 LTKP29376 864 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 TRIM26Q12899 539 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 RALGPS1Q5JS13 557 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 AGMOQ6ZNB7 445 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 ATG14Q6ZNE5 492 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 NPM2Q86SE8 214 aaKnown RBP6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 OXR1Q8N573 874 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 DHX38Q92620 1227 aaKnown RBP6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 AK5Q9Y6K8 562 aa6.13□□□□□ -1.43
SPTLC1-203ENST00000461132 GFRA2O00451 464 aa6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 TNNI2P48788 182 aa6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 YARSP54577 528 aaKnown RBP6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 KCNA10Q16322 511 aa6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 EAPPQ56P03 285 aaPredicted RBP6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 MCATQ8IVS2 390 aaKnown RBP6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 FAM13CQ8NE31 585 aa6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 CEP131Q9UPN4 1083 aa6.12□□□□□ -1.43
SPTLC1-203ENST00000461132 ESR1P03372 595 aa6.11□□□□□ -1.43
SPTLC1-203ENST00000461132 PLCG1P19174 1290 aa6.11□□□□□ -1.43
SPTLC1-203ENST00000461132 EGR3Q06889 387 aa6.11□□□□□ -1.43
SPTLC1-203ENST00000461132 CCDC27Q2M243 656 aa6.11□□□□□ -1.43
SPTLC1-203ENST00000461132 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 NUAK1O60285 661 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 HPXP02790 462 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 TMEM132EQ6IEE7 984 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 LILRA6Q6PI73 481 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 LILRA2Q8N149 483 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 PDZD8Q8NEN9 1154 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 CYB5D2Q8WUJ1 264 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 DUSP9Q99956 384 aaKnown RBP6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 SLC6A17Q9H1V8 727 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 ADAMTS10Q9H324 1103 aa6.1□□□□□ -1.43
SPTLC1-203ENST00000461132 FITM1A5D6W6 292 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 ETV2O00321 342 aaPredicted RBP6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 GLDCP23378 1020 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 ERVFC1P60507 584 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 CLEC16AQ2KHT3 1053 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 LCNL1Q6ZST4 164 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 SPPL2CQ8IUH8 684 aa6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 ACSF2Q96CM8 615 aaPredicted RBP6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 ASCC2Q9H1I8 757 aaPredicted RBP6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 CCDC9Q9Y3X0 531 aaKnown RBP6.09□□□□□ -1.43
SPTLC1-203ENST00000461132 MED14OSP0DP75 135 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 XPCQ01831 940 aaPredicted RBP6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 DUSP4Q13115 394 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 PSMD2Q13200 908 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 TSPYL5Q86VY4 417 aaPredicted RBP6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 C1QL4Q86Z23 238 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 CILP2Q8IUL8 1156 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 DTWD2Q8NBA8 298 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 Q96M66 194 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 GPR62Q9BZJ7 368 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 CWC22Q9HCG8 908 aaKnown RBP6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 CD320Q9NPF0 282 aa6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 SMG5Q9UPR3 1016 aaKnown RBP6.08□□□□□ -1.44
SPTLC1-203ENST00000461132 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 TFE3P19532 575 aaPredicted RBP6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 TRHRP34981 398 aaPredicted RBP6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 PDE6BP35913 854 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 MEI1Q5TIA1 1274 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 RNF141Q8WVD5 230 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 NOC4LQ9BVI4 516 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 RNF32Q9H0A6 362 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 DUSP15Q9H1R2 295 aaPredicted RBP6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 KCNK12Q9HB15 430 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 TLR6Q9Y2C9 796 aa6.07□□□□□ -1.44
SPTLC1-203ENST00000461132 ITGAEP38570 1179 aa6.06□□□□□ -1.44
SPTLC1-203ENST00000461132 ST13P50502 369 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-203ENST00000461132 LINC00310P59036 64 aa6.06□□□□□ -1.44
SPTLC1-203ENST00000461132 CHRNEQ04844 493 aa6.06□□□□□ -1.44
SPTLC1-203ENST00000461132 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
SPTLC1-203ENST00000461132 ZNF605Q86T29 641 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms