RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 NFXL1Q6ZNB6 911 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 STOX1Q6ZVD7 989 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CATIPQ7Z7H3 387 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 ANKS1AQ92625 1134 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 CCDC102AQ96A19 550 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 WDR18Q9BV38 432 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 KAT14Q9H8E8 782 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 GOPCQ9HD26 462 aa14.48□□□□□ -0.09
HDAC4-206ENST00000460235 UBE2Q2LH0YL09 131 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 INPP5BP32019 993 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 VGLL4Q14135 290 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 ADCK5Q3MIX3 580 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 ZNF280CQ8ND82 737 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 MKL1Q969V6 931 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 FEZ1Q99689 392 aa14.47□□□□□ -0.09
HDAC4-206ENST00000460235 ABT1Q9ULW3 272 aaKnown RBP14.47□□□□□ -0.09
HDAC4-206ENST00000460235 TNKSO95271 1327 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 SPDYE5A6NIY4 337 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 USP17L10C9JJH3 530 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CXCL11O14625 94 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 ZBTB48P10074 688 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-206ENST00000460235 PTPRAP18433 802 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 APLP1P51693 650 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 RCAN1P53805 252 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 EXOSC10Q01780 885 aaKnown RBP14.46□□□□□ -0.09
HDAC4-206ENST00000460235 PPIL2Q13356 520 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 SEPT2Q15019 361 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CST9Q5W186 159 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-206ENST00000460235 LPAR1Q92633 364 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CEP95Q96GE4 821 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 INCENPQ9NQS7 918 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 TMOD4Q9NZQ9 345 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 CLIP2Q9UDT6 1046 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 SLC12A7Q9Y666 1083 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 TLL2Q9Y6L7 1015 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 ZHX2Q9Y6X8 837 aa14.46□□□□□ -0.09
HDAC4-206ENST00000460235 MYH8P13535 1937 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 IGKV6D-41A0A0C4DH26 115 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 SSC5DA1L4H1 1573 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 DHX16O60231 1041 aaKnown RBP14.45□□□□□ -0.1
HDAC4-206ENST00000460235 KIF5BP33176 963 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 EVX2Q03828 476 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 RGMBQ6NW40 437 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 CYB5R4Q7L1T6 521 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 FASTKD5Q7L8L6 764 aaKnown RBP14.45□□□□□ -0.1
HDAC4-206ENST00000460235 SAPCD2Q86UD0 394 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-206ENST00000460235 ZSCAN31Q96LW9 406 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-206ENST00000460235 UPF3BQ9BZI7 483 aaKnown RBP14.45□□□□□ -0.1
HDAC4-206ENST00000460235 KIAA1683Q9H0B3 1180 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
HDAC4-206ENST00000460235 SMIM22K7EJ46 135 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 DDAH1O94760 285 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 EEF2P13639 858 aaKnown RBP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 ECE1P42892 770 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 NOVP48745 357 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 GNAQP50148 359 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 ZNF157P51786 506 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 GTF2A2P52657 109 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 BACE1P56817 501 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 INHBEP58166 350 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 PABPC4Q13310 644 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 CPLX2Q6PUV4 134 aaKnown RBP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 Q6ZUG5 572 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 ENAHQ8N8S7 591 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-206ENST00000460235 IGDCC4Q8TDY8 1250 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 MAP3K14Q99558 947 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 ELP3Q9H9T3 547 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 SNCAIPQ9Y6H5 919 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 TAF6LQ9Y6J9 622 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
HDAC4-206ENST00000460235 SPP2Q13103 211 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 OTUD7BQ6GQQ9 843 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 DLK2Q6UY11 383 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 GMCL1P1Q8NEA9 526 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 CTCFLQ8NI51 663 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-206ENST00000460235 OPTNQ96CV9 577 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-206ENST00000460235 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 ZKSCAN3Q9BRR0 538 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 AGXT2Q9BYV1 514 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 SH2B1Q9NRF2 756 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-206ENST00000460235 IL17RBQ9NRM6 502 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 NAP1L2Q9ULW6 460 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-206ENST00000460235 LIMCH1Q9UPQ0 1083 aa14.43□□□□□ -0.1
HDAC4-206ENST00000460235 ZBTB43O43298 467 aa14.42□□□□□ -0.1
HDAC4-206ENST00000460235 CETPP11597 493 aa14.42□□□□□ -0.1
HDAC4-206ENST00000460235 ANTXR2P58335 489 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms