RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 TSPY3P0CV98 308 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 TSPY8P0CW00 308 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 PTPRAP18433 802 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 C1QTNF8P60827 252 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 TRDNQ13061 729 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 KRT32Q14532 448 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 SEPT2Q15019 361 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CCDC84Q86UT8 332 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 NCOA7Q8NI08 942 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 NOVP48745 357 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 ANTXR2P58335 489 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 ANAPC15P60006 121 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
GARNL3-211ENST00000460176 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
GARNL3-211ENST00000460176 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 C22orf23Q9BZE7 217 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
GARNL3-211ENST00000460176 IL17RBQ9NRM6 502 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
GARNL3-211ENST00000460176 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 NMT2O60551 498 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 GJA5P36382 358 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 ERO1BQ86YB8 467 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 OPTNQ96CV9 577 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
GARNL3-211ENST00000460176 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 RASSF10A6NK89 507 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 PRC1O43663 620 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 CPA1P15085 419 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 MCM5P33992 734 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-211ENST00000460176 ICA1Q05084 483 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 PPATQ06203 517 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 PPIL2Q13356 520 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 KIF2CQ99661 725 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 WDR18Q9BV38 432 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 AFG3L2Q9Y4W6 797 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 TNKSO95271 1327 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
GARNL3-211ENST00000460176 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 SLC10A3P09131 477 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 HSPA6P17066 643 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 CASTP20810 708 aaKnown RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 RPS6KB1P23443 525 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 PSMA5P28066 241 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 HTRA3P83110 453 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 NBR1Q14596 966 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 SEC23AQ15436 765 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 DHX32Q7L7V1 743 aaKnown RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 ZNF280CQ8ND82 737 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-211ENST00000460176 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 ZHX2Q9Y6X8 837 aa12.06□□□□□ -0.48
GARNL3-211ENST00000460176 IRF6O14896 467 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 TTLL1O95922 423 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-211ENST00000460176 ECE1P42892 770 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms