RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TNPO2O14787 897 aaKnown RBP19.45■□□□□ 0.7
CPSF6-203ENST00000456847 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
CPSF6-203ENST00000456847 GNAT2P19087 354 aa19.44■□□□□ 0.7
CPSF6-203ENST00000456847 HOXA7P31268 230 aaPredicted RBP19.44■□□□□ 0.7
CPSF6-203ENST00000456847 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
CPSF6-203ENST00000456847 TMEM179Q6ZVK1 233 aa19.44■□□□□ 0.7
CPSF6-203ENST00000456847 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
CPSF6-203ENST00000456847 SH3TC2Q8TF17 1288 aa19.44■□□□□ 0.7
CPSF6-203ENST00000456847 APPP05067 770 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 TDO2P48775 406 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 CDK8P49336 464 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 PDE1AP54750 535 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 PRKCZQ05513 592 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 C16orf86Q6ZW13 317 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 C12orf42Q96LP6 360 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 KIAA1683Q9H0B3 1180 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 GSG1L2A8MUP6 293 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 SMIM22K7EJ46 135 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 MYCP01106 439 aaPredicted RBP19.43■□□□□ 0.7
CPSF6-203ENST00000456847 AKR1B1P15121 316 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 P2RX7Q99572 595 aaKnown RBP19.43■□□□□ 0.7
CPSF6-203ENST00000456847 TMEM106CQ9BVX2 250 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 STAP2Q9UGK3 403 aa19.43■□□□□ 0.7
CPSF6-203ENST00000456847 MINDY4BA8MYZ0 360 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 HERVK_113P62684 666 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 GIMAP6Q6P9H5 292 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 STK11IPQ8N1F8 1099 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 COA7Q96BR5 231 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 CCDC17Q96LX7 622 aa19.42■□□□□ 0.7
CPSF6-203ENST00000456847 IGHDP01880 384 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 EVI5LQ96CN4 794 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 SEC62Q99442 399 aaKnown RBP19.41■□□□□ 0.7
CPSF6-203ENST00000456847 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 GABRQQ9UN88 632 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 VCAM1P19320 739 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
CPSF6-203ENST00000456847 ICA1Q05084 483 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 GTF3C2Q8WUA4 911 aaPredicted RBP19.41■□□□□ 0.7
CPSF6-203ENST00000456847 PAGR1Q9BTK6 254 aa19.41■□□□□ 0.7
CPSF6-203ENST00000456847 BIN2Q9UBW5 565 aaPredicted RBP19.41■□□□□ 0.7
CPSF6-203ENST00000456847 POTEFA5A3E0 1075 aa19.4■□□□□ 0.7
CPSF6-203ENST00000456847 GRK4P32298 578 aa19.4■□□□□ 0.7
CPSF6-203ENST00000456847 CLEC10AQ8IUN9 316 aa19.4■□□□□ 0.7
CPSF6-203ENST00000456847 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
CPSF6-203ENST00000456847 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
CPSF6-203ENST00000456847 MORF4L1Q9UBU8 362 aa19.4■□□□□ 0.7
CPSF6-203ENST00000456847 CHD1LQ86WJ1 897 aa19.39■□□□□ 0.7
CPSF6-203ENST00000456847 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.7
CPSF6-203ENST00000456847 SH2D4AQ9H788 454 aa19.39■□□□□ 0.7
CPSF6-203ENST00000456847 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.7
CPSF6-203ENST00000456847 DOCK3Q8IZD9 2030 aa19.39■□□□□ 0.69
CPSF6-203ENST00000456847 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
CPSF6-203ENST00000456847 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
CPSF6-203ENST00000456847 FLT3LGP49771 235 aa19.39■□□□□ 0.69
CPSF6-203ENST00000456847 ATP2B2Q01814 1243 aa19.39■□□□□ 0.69
CPSF6-203ENST00000456847 SLAIN1Q8ND83 568 aa19.39■□□□□ 0.69
CPSF6-203ENST00000456847 ROBO3Q96MS0 1386 aa19.38■□□□□ 0.69
CPSF6-203ENST00000456847 A0A1W2PRG0 241 aa19.38■□□□□ 0.69
CPSF6-203ENST00000456847 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
CPSF6-203ENST00000456847 IFNL3Q8IZI9 196 aa19.38■□□□□ 0.69
CPSF6-203ENST00000456847 GPRC5AQ8NFJ5 357 aa19.38■□□□□ 0.69
CPSF6-203ENST00000456847 NAPBQ9H115 298 aa19.38■□□□□ 0.69
CPSF6-203ENST00000456847 PEX10O60683 326 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 UBXN2AP68543 259 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 NUCB1Q02818 461 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 CATSPERGQ6ZRH7 1159 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 CCDC129Q6ZRS4 1044 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 TANGO6Q9C0B7 1094 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 CWC22Q9HCG8 908 aaKnown RBP19.37■□□□□ 0.69
CPSF6-203ENST00000456847 TXNRD2Q9NNW7 524 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
CPSF6-203ENST00000456847 ADCY3O60266 1144 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 ERVK-9P63128 1117 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 ERVK-24P63145 666 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 RILPL2Q969X0 211 aa19.37■□□□□ 0.69
CPSF6-203ENST00000456847 ZNF287Q9HBT7 754 aa19.36■□□□□ 0.69
CPSF6-203ENST00000456847 RBPJLQ9UBG7 517 aa19.36■□□□□ 0.69
CPSF6-203ENST00000456847 HTTP42858 3142 aa19.36■□□□□ 0.69
CPSF6-203ENST00000456847 ELNP15502 786 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 IRF5Q13568 498 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 KANSL2Q9H9L4 492 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 RAD21O60216 631 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 EEF2P13639 858 aaKnown RBP19.35■□□□□ 0.69
CPSF6-203ENST00000456847 EN2P19622 333 aaPredicted RBP19.35■□□□□ 0.69
CPSF6-203ENST00000456847 RASA1P20936 1047 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 LPAR1Q92633 364 aa19.35■□□□□ 0.69
CPSF6-203ENST00000456847 TMX2Q9Y320 296 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms