RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 FAM83AQ86UY5 434 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SRBD1Q8N5C6 995 aaKnown RBP8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SLC44A5Q8NCS7 719 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TMEM47Q9BQJ4 181 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SPON1Q9HCB6 807 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 RTEL1Q9NZ71 1219 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 RBM27Q9P2N5 1060 aaKnown RBP8.71□□□□□ -1.02
ERCC3-204ENST00000456257 SAP30BPQ9UHR5 308 aaKnown RBP8.71□□□□□ -1.02
ERCC3-204ENST00000456257 CFAP45Q9UL16 551 aa8.71□□□□□ -1.02
ERCC3-204ENST00000456257 VPS37CA5D8V6 355 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 F8W031 263 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 H3BQV1 296 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 TSPY3P0CV98 308 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 TSPY8P0CW00 308 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 KIF5BP33176 963 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 GUCY1A2P33402 732 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 NASPP49321 788 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 ZNF445P59923 1031 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 KIF23Q02241 960 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 SLC35G1Q2M3R5 365 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 CIAPIN1Q6FI81 312 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 SIAH1Q8IUQ4 282 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 TRIM22Q8IYM9 498 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 PNMA1Q8ND90 353 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 LEO1Q8WVC0 666 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 FAM151AQ8WW52 585 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 MYL10Q9BUA6 226 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 SPZ1Q9BXG8 430 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 FOXP1Q9H334 677 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 DNAJC18Q9H819 358 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 NYAP2Q9P242 653 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 ZNF70Q9UC06 446 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 MAD2L2Q9UI95 211 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 HDAC9Q9UKV0 1011 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 PCDHAC2Q9Y5I4 1007 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 DDX49Q9Y6V7 483 aaKnown RBP8.7□□□□□ -1.02
ERCC3-204ENST00000456257 FOCADQ5VW36 1801 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 FER1L6Q2WGJ9 1857 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 CDK5RAP2Q96SN8 1893 aa8.7□□□□□ -1.02
ERCC3-204ENST00000456257 DDTLA6NHG4 134 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 RAD17O75943 681 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 HLA-DOAP06340 250 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 RXRAP19793 462 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 DLGAP5Q15398 846 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 NPY5RQ15761 445 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 KRT40Q6A162 431 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 STK11IPQ8N1F8 1099 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 JDP2Q8WYK2 163 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 PHKBQ93100 1093 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 SHISA4Q96DD7 197 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 CEP95Q96GE4 821 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 RIOX1Q9H6W3 641 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 TDRD3Q9H7E2 651 aaKnown RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 KAT14Q9H8E8 782 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
ERCC3-204ENST00000456257 HERC5Q9UII4 1024 aaKnown RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-204ENST00000456257 LAMB1P07942 1786 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 YEATS4O95619 227 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 MMP1P03956 469 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 AKR1B1P15121 316 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 PFKFB3Q16875 520 aaPredicted RBP8.68□□□□□ -1.02
ERCC3-204ENST00000456257 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 GALNT17Q6IS24 598 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 FAM173BQ6P4H8 233 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 FERMT3Q86UX7 667 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 RAB11FIP4Q86YS3 637 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 LINC00301Q8NCQ3 95 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 CTCFLQ8NI51 663 aaPredicted RBP8.68□□□□□ -1.02
ERCC3-204ENST00000456257 TNFRSF25Q93038 417 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 MTMR8Q96EF0 704 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 PGBD1Q96JS3 809 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 AIFM3Q96NN9 605 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 SLC26A6Q9BXS9 759 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 KANSL2Q9H9L4 492 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 TFIP11Q9UBB9 837 aaKnown RBP8.68□□□□□ -1.02
ERCC3-204ENST00000456257 CNTNAP1P78357 1384 aa8.68□□□□□ -1.02
ERCC3-204ENST00000456257 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
ERCC3-204ENST00000456257 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
ERCC3-204ENST00000456257 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
ERCC3-204ENST00000456257 A0A1W2PQD8 194 aa8.67□□□□□ -1.02
ERCC3-204ENST00000456257 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms