RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RRP7AQ9Y3A4 280 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 SAR1BQ9Y6B6 198 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 HARSP12081 509 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 EEF1GP26641 437 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 BAG5Q9UL15 447 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PAIP2BQ9ULR5 123 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CHD2O14647 1828 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 PCM1Q15154 2024 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 E7ENQ6 273 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 DHX9Q08211 1270 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 CACTINQ8WUQ7 758 aaKnown RBP5.76□□□□□ -1.49
CSMD3-204ENST00000455883 EPSTI1Q96J88 318 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 DIABLOQ9NR28 239 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 NDUFA13Q9P0J0 144 aa5.76□□□□□ -1.49
CSMD3-204ENST00000455883 USP19O94966 1318 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 BPIFB4P59827 614 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 CBX1P83916 185 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PLCB4Q15147 1175 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 LRRC23Q53EV4 343 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 TBC1D9Q6ZT07 1266 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 KCTD17Q8N5Z5 321 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 DNAJC25Q9H1X3 360 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PLIN1O60240 522 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGAP27Q6ZUM4 889 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 DHX32Q7L7V1 743 aaKnown RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 TTC39CQ8N584 583 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PPP1R2P1Q96PQ5 205 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 MKNK2Q9HBH9 465 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 GIMAP4Q9NUV9 329 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ZC3H13Q5T200 1668 aaKnown RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 EFCAB14O75071 495 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 XRCC6P12956 609 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 KCNA4P22459 653 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 DMTNQ08495 405 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 FOXD4L6Q3SYB3 417 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 FOXD4L3Q6VB84 417 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 FOXP3Q9BZS1 431 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 STOML1Q9UBI4 398 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 RCAN1P53805 252 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 RRAGBQ5VZM2 374 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 MAST3O60307 1309 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 SERPINB2P05120 415 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ALCAMQ13740 583 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 NBPF14Q5TI25 921 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 KRT79Q5XKE5 535 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 VSIG1Q86XK7 387 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ABTB2Q8N961 1025 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 EPC1Q9H2F5 836 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 SMARCAL1Q9NZC9 954 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 SPDYE3A6NKU9 549 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 SEMA3EO15041 775 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 WTAPQ15007 396 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 RTN1Q16799 776 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PPP4R3CPQ6ZMV5 832 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGAP26Q9UNA1 814 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PYGBP11216 843 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 MCMDC2Q4G0Z9 681 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 MMS22LQ6ZRQ5 1243 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 SH3GL3Q99963 347 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 PLEKHG1Q9ULL1 1385 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 MINK1Q8N4C8 1332 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 DCTN3O75935 186 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ANO6Q4KMQ2 910 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 ZNF444Q8N0Y2 327 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-204ENST00000455883 LRRC37BQ96QE4 947 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 WWC3Q9ULE0 1092 aa5.75□□□□□ -1.49
CSMD3-204ENST00000455883 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 GCKP35557 465 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 EPHB4P54760 987 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 NLRP6P59044 892 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 XPCQ01831 940 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 NLRP7Q8WX94 980 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 SPDL1Q96EA4 605 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 ANLNQ9NQW6 1124 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 VPS18Q9P253 973 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 PASKQ96RG2 1323 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 A0A1W2PQ27 194 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 A0A1W2PQ64 194 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 A0A1W2PQD8 194 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 SMAPO00193 183 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 SYNRGQ9UMZ2 1314 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGEF40Q8TER5 1519 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 TRIP11Q15643 1979 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 RBM10P98175 930 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 IL9RQ01113 521 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 AOC3Q16853 763 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC92Q53HC0 331 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 PDE6CP51160 858 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 SAFB2Q14151 953 aaKnown RBP eCLIP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 AK8Q96MA6 479 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 BRIP1Q9BX63 1249 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 C10orf88Q9H8K7 445 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 RPAP1Q9BWH6 1393 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 DNM2P50570 870 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 HDAC4P56524 1084 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 GSTA5Q7RTV2 222 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 SECISBP2LQ93073 1101 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms