RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 NOVP48745 357 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 ANAPC15P60006 121 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 ICA1Q05084 483 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 SPP2Q13103 211 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 CYP4F22Q6NT55 531 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 MKL1Q969V6 931 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 TTC14Q96N46 770 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 BAZ2AQ9UIF9 1905 aaKnown RBP16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 USP17L10C9JJH3 530 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 KDM4AO75164 1064 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 TTLL1O95922 423 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 GJA5P36382 358 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 VEGFBP49765 207 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 USP14P54578 494 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 BACE1P56817 501 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 HTRA3P83110 453 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 SH3D19Q5HYK7 790 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 FASTKD5Q7L8L6 764 aaKnown RBP16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
HMGXB4-204ENST00000455359 A0A0G2JLL6 359 aaPredicted RBP16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 B4E1Z4 1266 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 PSMA5P28066 241 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 STOX1Q6ZVD7 989 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 PRRT2Q7Z6L0 340 aaPredicted RBP16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 CEP95Q96GE4 821 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 MS4A4AQ96JQ5 239 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 ZSWIM5Q9P217 1185 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 TMX2Q9Y320 296 aa16.86■□□□□ 0.29
HMGXB4-204ENST00000455359 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 TRIM75PA6NK02 468 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 SEC24BO95487 1268 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 MCM5P33992 734 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 TM4SF4P48230 202 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 MB21D2Q8IYB1 491 aaPredicted RBP16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 PROCA1Q8NCQ7 364 aaPredicted RBP16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 ANKS1AQ92625 1134 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 C12orf42Q96LP6 360 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 NEK1Q96PY6 1258 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 FEZ1Q99689 392 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 UBAC1Q9BSL1 405 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 ZCCHC17Q9NP64 241 aaKnown RBP16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 IL17RBQ9NRM6 502 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
HMGXB4-204ENST00000455359 LAMB1P07942 1786 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 OTUD7BQ6GQQ9 843 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 LPAR1Q92633 364 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 TM6SF1Q9BZW5 370 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 TMOD4Q9NZQ9 345 aa16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-204ENST00000455359 CCL15-CCL14A0A0B4J2E2 113 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 A0A1W2PRG0 241 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 MTMR2Q13614 643 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 CCL15Q16663 113 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 DHX32Q7L7V1 743 aaKnown RBP16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 ACER1Q8TDN7 264 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 CLIP2Q9UDT6 1046 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 SLC45A1Q9Y2W3 748 aa16.83■□□□□ 0.28
HMGXB4-204ENST00000455359 ERICH2A1L162 156 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 ALDH1A1P00352 501 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 GRM1Q13255 1194 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 PABPC4Q13310 644 aaKnown RBP eCLIP16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 ANKRD23Q86SG2 305 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 VCPKMTQ9H867 229 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 EMILIN3Q9NT22 766 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 TNKSO95271 1327 aa16.82■□□□□ 0.28
HMGXB4-204ENST00000455359 NMT2O60551 498 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 HMGCS2P54868 508 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 MOGSQ13724 837 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms