RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 TTC22Q5TAA0 569 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 C16orf86Q6ZW13 317 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 ZNF287Q9HBT7 754 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 CYP2D7A0A087X1C5 515 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 HOXD10P28358 340 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 EVX2Q03828 476 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 SLC44A5Q8NCS7 719 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 SEC62Q99442 399 aaKnown RBP21.18■□□□□ 0.98
COPS7A-202ENST00000455113 PTPN22Q9Y2R2 807 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 FMNL1O95466 1100 aaPredicted RBP21.17■□□□□ 0.98
COPS7A-202ENST00000455113 GCLCP48506 637 aaPredicted RBP21.17■□□□□ 0.98
COPS7A-202ENST00000455113 SEPT2Q15019 361 aa21.17■□□□□ 0.98
COPS7A-202ENST00000455113 ZYXQ15942 572 aaKnown RBP21.17■□□□□ 0.98
COPS7A-202ENST00000455113 NAPBQ9H115 298 aa21.17■□□□□ 0.98
COPS7A-202ENST00000455113 MKNK2Q9HBH9 465 aa21.17■□□□□ 0.98
COPS7A-202ENST00000455113 ADGRA2Q96PE1 1338 aa21.17■□□□□ 0.98
COPS7A-202ENST00000455113 ECM2O94769 699 aaPredicted RBP21.16■□□□□ 0.98
COPS7A-202ENST00000455113 PSMC4P43686 418 aa21.16■□□□□ 0.98
COPS7A-202ENST00000455113 IFNL3Q8IZI9 196 aa21.16■□□□□ 0.98
COPS7A-202ENST00000455113 HELLSQ9NRZ9 838 aa21.16■□□□□ 0.98
COPS7A-202ENST00000455113 SLC3A2P08195 630 aaKnown RBP21.15■□□□□ 0.98
COPS7A-202ENST00000455113 BCRP11274 1271 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 GSPT1P15170 499 aaKnown RBP21.15■□□□□ 0.98
COPS7A-202ENST00000455113 HOXA7P31268 230 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-202ENST00000455113 FCGRTP55899 365 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 ANKRD13CQ8N6S4 541 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 KIAA1683Q9H0B3 1180 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 ASCC2Q9H1I8 757 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-202ENST00000455113 SH2D4AQ9H788 454 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 ARHGEF10LQ9HCE6 1279 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 PRMT2P55345 433 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 BMP2KLQ5H9B9 411 aa21.15■□□□□ 0.98
COPS7A-202ENST00000455113 FAM110CQ1W6H9 321 aa21.14■□□□□ 0.97
COPS7A-202ENST00000455113 STK11IPQ8N1F8 1099 aa21.14■□□□□ 0.97
COPS7A-202ENST00000455113 C12orf42Q96LP6 360 aa21.14■□□□□ 0.97
COPS7A-202ENST00000455113 ARHGAP39Q9C0H5 1083 aa21.14■□□□□ 0.97
COPS7A-202ENST00000455113 EMILIN3Q9NT22 766 aa21.14■□□□□ 0.97
COPS7A-202ENST00000455113 AKR1B1P15121 316 aa21.13■□□□□ 0.97
COPS7A-202ENST00000455113 GUCY1A2P33402 732 aa21.13■□□□□ 0.97
COPS7A-202ENST00000455113 ICA1Q05084 483 aa21.13■□□□□ 0.97
COPS7A-202ENST00000455113 MCMDC2Q4G0Z9 681 aa21.13■□□□□ 0.97
COPS7A-202ENST00000455113 NBPF11Q86T75 865 aa21.13■□□□□ 0.97
COPS7A-202ENST00000455113 GTF3C2Q8WUA4 911 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-202ENST00000455113 EPB41L4AQ9HCS5 686 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-202ENST00000455113 ZNF444Q8N0Y2 327 aaPredicted RBP21.12■□□□□ 0.97
COPS7A-202ENST00000455113 ACER1Q8TDN7 264 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
COPS7A-202ENST00000455113 PDE4BQ07343 736 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 CCDC129Q6ZRS4 1044 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 KANSL2Q9H9L4 492 aa21.12■□□□□ 0.97
COPS7A-202ENST00000455113 HIP1O00291 1037 aa21.11■□□□□ 0.97
COPS7A-202ENST00000455113 SLC9C1Q4G0N8 1177 aa21.11■□□□□ 0.97
COPS7A-202ENST00000455113 TRIM47Q96LD4 638 aa21.11■□□□□ 0.97
COPS7A-202ENST00000455113 ROBO3Q96MS0 1386 aa21.11■□□□□ 0.97
COPS7A-202ENST00000455113 SMIM22K7EJ46 135 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 TNPO2O14787 897 aaKnown RBP21.1■□□□□ 0.97
COPS7A-202ENST00000455113 VCAM1P19320 739 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 SDSP20132 328 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 HERVK_113P62684 666 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 CAP1Q01518 475 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 RAET1EQ8TD07 263 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 P2RX7Q99572 595 aaKnown RBP21.1■□□□□ 0.97
COPS7A-202ENST00000455113 DIAPH3Q9NSV4 1193 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 SRRDQ9UH36 339 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 PTCH2Q9Y6C5 1203 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 MYPNQ86TC9 1320 aa21.1■□□□□ 0.97
COPS7A-202ENST00000455113 CCAR1Q8IX12 1150 aaKnown RBP21.09■□□□□ 0.97
COPS7A-202ENST00000455113 COA7Q96BR5 231 aa21.09■□□□□ 0.97
COPS7A-202ENST00000455113 FAM227BQ96M60 508 aa21.09■□□□□ 0.97
COPS7A-202ENST00000455113 MGAMO43451 1857 aa21.09■□□□□ 0.97
COPS7A-202ENST00000455113 PPARAQ07869 468 aa21.09■□□□□ 0.97
COPS7A-202ENST00000455113 NMIQ13287 307 aaPredicted RBP21.09■□□□□ 0.97
COPS7A-202ENST00000455113 LPAR1Q92633 364 aa21.09■□□□□ 0.97
COPS7A-202ENST00000455113 A0A0D9SFI3 127 aa21.08■□□□□ 0.97
COPS7A-202ENST00000455113 CATSPERGQ6ZRH7 1159 aa21.08■□□□□ 0.97
COPS7A-202ENST00000455113 GPRC5AQ8NFJ5 357 aa21.08■□□□□ 0.97
COPS7A-202ENST00000455113 RPAP3Q9H6T3 665 aaPredicted RBP21.08■□□□□ 0.97
COPS7A-202ENST00000455113 TMX2Q9Y320 296 aa21.08■□□□□ 0.97
COPS7A-202ENST00000455113 ZSWIM8A7E2V4 1837 aa21.08■□□□□ 0.96
COPS7A-202ENST00000455113 A0A1W2PRG0 241 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 RASA1P20936 1047 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 CTGFP29279 349 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 GOPCQ9HD26 462 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 RAD21O60216 631 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 PRDM1O75626 825 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 EEF2P13639 858 aaKnown RBP21.07■□□□□ 0.96
COPS7A-202ENST00000455113 PAGR1Q9BTK6 254 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 TANGO6Q9C0B7 1094 aa21.07■□□□□ 0.96
COPS7A-202ENST00000455113 CCDC171Q6TFL3 1326 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 TSPY3P0CV98 308 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms