RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SEC31AO94979 1220 aaKnown RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 CMA1P23946 247 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 PRDX5P30044 214 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 PDE4BQ07343 736 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 PTPROQ16827 1216 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 NEMFO60524 1076 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 CRYBG1Q9Y4K1 1723 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 EVCP57679 992 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
DDR1-240ENST00000454612 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 RIPOR2Q9Y4F9 1068 aa12.67□□□□□ -0.38
DDR1-240ENST00000454612 H0YHG0 523 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 KIF5CO60282 957 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 DEXIO95424 95 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
DDR1-240ENST00000454612 PTGDRQ13258 359 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 IQCB1Q15051 598 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
DDR1-240ENST00000454612 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
DDR1-240ENST00000454612 AK7Q96M32 723 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 CENPHQ9H3R5 247 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 NAPAP54920 295 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 MRPS25P82663 173 aaKnown RBP12.66□□□□□ -0.38
DDR1-240ENST00000454612 UBXN1Q04323 297 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 SHC4Q6S5L8 630 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 MMRN2Q9H8L6 949 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 TBC1D7Q9P0N9 293 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 DYMQ7RTS9 669 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
DDR1-240ENST00000454612 FEZ1Q99689 392 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 POLD4Q9HCU8 107 aa12.66□□□□□ -0.38
DDR1-240ENST00000454612 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 MYO1BO43795 1136 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
DDR1-240ENST00000454612 EPS15P42566 896 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 CASP7P55210 303 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 ASIC1P78348 528 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 EVX2Q03828 476 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 TTC38Q5R3I4 469 aa12.65□□□□□ -0.38
DDR1-240ENST00000454612 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
DDR1-240ENST00000454612 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
DDR1-240ENST00000454612 USP17L3A6NCW0 530 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 USP17L4A6NCW7 530 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 CIAO1O76071 339 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.39
DDR1-240ENST00000454612 TNNI2P48788 182 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.39
DDR1-240ENST00000454612 INF2Q27J81 1249 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 RILPL1Q5EBL4 403 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.39
DDR1-240ENST00000454612 CUTAO60888 179 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 TXKP42681 527 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 NCBP1Q09161 790 aaKnown RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 MTF1Q14872 753 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 UBE3CQ15386 1083 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 TDRD12Q587J7 1177 aaKnown RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 MRFAP1L1Q96HT8 127 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 KLRK1P26718 216 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 GYS2P54840 703 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 TCP10Q12799 353 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 STIM1Q13586 685 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
DDR1-240ENST00000454612 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
DDR1-240ENST00000454612 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 UBN2Q6ZU65 1347 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 LRP6O75581 1613 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 COL22A1Q8NFW1 1626 aaPredicted RBP12.63□□□□□ -0.39
DDR1-240ENST00000454612 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
DDR1-240ENST00000454612 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
DDR1-240ENST00000454612 TMTC2Q8N394 836 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 JADE2Q9NQC1 790 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms