RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PHAXQ9H814 394 aaKnown RBP5.53□□□□□ -1.52
HMGB1P15-201ENST00000453854 EIF5BO60841 1220 aaKnown RBP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 MED26O95402 600 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 NEFMP07197 916 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 ETF1P62495 437 aaKnown RBP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 SOX4Q06945 474 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 NCAPHQ15003 741 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 ARSHQ5FYA8 562 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 AKAP4Q5JQC9 854 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 NUTM2GQ5VZR2 741 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLC6A19Q695T7 634 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 C6orf15Q6UXA7 325 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 ST13P5Q8NFI4 369 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 TMEM87BQ96K49 555 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 ATXN3LQ9H3M9 355 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 FBRSQ9HAH7 460 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
HMGB1P15-201ENST00000453854 ANKRD62A6NC57 917 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 CCDC85CA6NKD9 419 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 B2RBV5 119 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 RGS13O14921 159 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 DDAH1O94760 285 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 NCLP19338 710 aaKnown RBP5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 YARSP54577 528 aaKnown RBP5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 IFRD2Q12894 506 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 NKG7Q16617 165 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 PLEKHG4Q58EX7 1191 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 KCT2Q8NC54 265 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 SH3TC2Q8TF17 1288 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 KLHL3Q9UH77 587 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 ZNF214Q9UL59 606 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 RAXQ9Y2V3 346 aa5.51□□□□□ -1.53
HMGB1P15-201ENST00000453854 RAG1P15918 1043 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 SSTR4P31391 388 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 TTLL4Q14679 1199 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 ANKRD34AQ69YU3 496 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 FAM13CQ8NE31 585 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 KLHL6Q8WZ60 621 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 ISL2Q96A47 359 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 FAM46AQ96IP4 442 aaKnown RBP5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 KANSL2Q9H9L4 492 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
HMGB1P15-201ENST00000453854 UBOX5O94941 541 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 CST3P01034 146 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 DRD2P14416 443 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 CD97P48960 835 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 SQSTM1Q13501 440 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 MTERF2Q49AM1 385 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 C2orf27AQ580R0 203 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 VHLLQ6RSH7 139 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 SPATC1Q76KD6 591 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 EEPD1Q7L9B9 569 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 UBE3DQ7Z6J8 389 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 C2CD4AQ8NCU7 369 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 THAP3Q8WTV1 239 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 DHRS1Q96LJ7 313 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 CCDC74BQ96LY2 380 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 PICK1Q9NRD5 415 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 STOML1Q9UBI4 398 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 ZMYM5Q9UJ78 669 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 AP4E1Q9UPM8 1137 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 ACTL7BQ9Y614 415 aa5.49□□□□□ -1.53
HMGB1P15-201ENST00000453854 HMX2A2RU54 273 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 DHX15O43143 795 aaKnown RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 DIAPH1O60610 1272 aaKnown RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 TGFB1P01137 390 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 HCLS1P14317 486 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 POLR2BP30876 1174 aaKnown RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 PMS1P54277 932 aaKnown RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLC7A5Q01650 507 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 KIAA0907Q7Z7F0 614 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 TMEM192Q8IY95 271 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 C12orf50Q8NA57 414 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 CYB5D2Q8WUJ1 264 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 EPN3Q9H201 632 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 C7orf69Q9H7B7 122 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 FAM105AQ9NUU6 356 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 SUCOQ9UBS9 1254 aaKnown RBP5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 PCDHB10Q9UN67 800 aa5.48□□□□□ -1.53
HMGB1P15-201ENST00000453854 COL17A1Q9UMD9 1497 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 SUSD5O60279 629 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 CLSTN1O94985 981 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 ASPAP45381 313 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 LONRF2Q1L5Z9 754 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 BBS9Q3SYG4 887 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 KIAA1211LQ6NV74 962 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 FDX2Q6P4F2 183 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 CDC37L1Q7L3B6 337 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 DYMQ7RTS9 669 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLC51AQ86UW1 340 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms