RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ALAS2P22557 587 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLBPQ14493 270 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 SV2CQ496J9 727 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 FNDC3BQ53EP0 1204 aaKnown RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TAF7LQ5H9L4 462 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 ODR4Q5SWX8 454 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLCO4C1Q6ZQN7 724 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 MRPL41Q8IXM3 137 aaKnown RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 AFAP1L2Q8N4X5 818 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 FAM13CQ8NE31 585 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 BAHD1Q8TBE0 780 aaPredicted RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 TARS2Q9BW92 718 aaKnown RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 USP26Q9BXU7 913 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 LRRC4BQ9NT99 713 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 CRIM1Q9NZV1 1036 aa5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 GDF2Q9UK05 429 aaPredicted RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 COL17A1Q9UMD9 1497 aaPredicted RBP5.81□□□□□ -1.48
HMGN3P1-201ENST00000453847 SYNGAP1Q96PV0 1343 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 TRBV23-1A0A0A0MS06 115 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 EIF4EBP3O60516 100 aaPredicted RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 NEFMP07197 916 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 C6orf222P0C671 652 aaPredicted RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF143P52747 638 aaPredicted RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 ETF1P62495 437 aaKnown RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 PPP2R2AP63151 447 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 NFKB2Q00653 900 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 EXOSC10Q01780 885 aaKnown RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 FAM117BQ6P1L5 589 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 CERS3Q8IU89 383 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 WFDC8Q8IUA0 241 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 UBASH3BQ8TF42 649 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 DPH2Q9BQC3 489 aaPredicted RBP5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 POLR3GLQ9BT43 218 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 KLHL25Q9H0H3 589 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 EID1Q9Y6B2 187 aa5.8□□□□□ -1.48
HMGN3P1-201ENST00000453847 M0R082 166 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 FANCGO15287 622 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 LILRB5O75023 590 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLFN14P0C7P3 912 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 CNGA1P29973 690 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLC6A19Q695T7 634 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF227Q86WZ6 799 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 HID1Q8IV36 788 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 SCUBE1Q8IWY4 988 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 DMRTC2Q8IXT2 367 aaPredicted RBP5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF417Q8TAU3 575 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 SLC7A14Q8TBB6 771 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 PPP1R13LQ8WUF5 828 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 ACDQ96AP0 544 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 VWCEQ96DN2 955 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 FGD4Q96M96 766 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF587Q96SQ5 575 aaPredicted RBP5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 APBA2Q99767 749 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 HAUS7Q99871 368 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 RUSC1Q9BVN2 902 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 GABBR1Q9UBS5 961 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF451Q9Y4E5 1061 aa5.79□□□□□ -1.48
HMGN3P1-201ENST00000453847 TRAV20A0A0B4J274 112 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 C11orf95C9JLR9 678 aaPredicted RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 DLL1O00548 723 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 SHOXO15266 292 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 DNAJC8O75937 253 aaPredicted RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 PABPC1P11940 636 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 NID1P14543 1247 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 CD68P34810 354 aaPredicted RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 KRT76Q01546 638 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 ID3Q02535 119 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 FAM50AQ14320 339 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 EXOSC6Q5RKV6 272 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 DCAF15Q66K64 600 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 LHFPL2Q6ZUX7 228 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 LRRTM3Q86VH5 581 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 GOLGA6L1Q8N7Z2 621 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 RNF214Q8ND24 703 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 LRRN4CLQ8ND94 238 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 TSR2Q969E8 191 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 BTBD6Q96KE9 485 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 ZNF512BQ96KM6 892 aaPredicted RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 MRGPRX3Q96LB0 322 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 DHRS1Q96LJ7 313 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 FANCD2OSQ96PS1 177 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 AARSD1Q9BTE6 412 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 MRPL4Q9BYD3 311 aaKnown RBP5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 TMPRSS13Q9BYE2 586 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 TRIM39Q9HCM9 518 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 PRDM6Q9NQX0 595 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 MAPRE3Q9UPY8 281 aa5.78□□□□□ -1.48
HMGN3P1-201ENST00000453847 ARID4BQ4LE39 1312 aaPredicted RBP5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 DNAJC25-GNG10A0A024R161 153 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 PRODHO43272 600 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 WISP1O95388 367 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 FGFR1P11362 822 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 SOX5P35711 763 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 YARSP54577 528 aaKnown RBP5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 HSP90AA2PQ14568 343 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms