RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ALX1Q15699 326 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 TMEM179Q6ZVK1 233 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 TRIM47Q96LD4 638 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 CABP5Q9NP86 173 aa19.3■□□□□ 0.68
SCAMP4-205ENST00000452128 RASA1P20936 1047 aa19.29■□□□□ 0.68
SCAMP4-205ENST00000452128 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
SCAMP4-205ENST00000452128 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
SCAMP4-205ENST00000452128 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
SCAMP4-205ENST00000452128 P2RX7Q99572 595 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-205ENST00000452128 CENPFP49454 3210 aa19.28■□□□□ 0.68
SCAMP4-205ENST00000452128 SDSP20132 328 aa19.28■□□□□ 0.68
SCAMP4-205ENST00000452128 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
SCAMP4-205ENST00000452128 TACC3Q9Y6A5 838 aa19.28■□□□□ 0.68
SCAMP4-205ENST00000452128 IGKV6D-41A0A0C4DH26 115 aa19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 GNRH1P01148 92 aa19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 GSPT1P15170 499 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 TMOD4Q9NZQ9 345 aa19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 MORF4L1Q9UBU8 362 aa19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 TMX2Q9Y320 296 aa19.27■□□□□ 0.68
SCAMP4-205ENST00000452128 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 PSMC4P43686 418 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 GCLCP48506 637 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 RGS19P49795 217 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 USP14P54578 494 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 PABPC4Q13310 644 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 RBPJLQ9UBG7 517 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
SCAMP4-205ENST00000452128 TRIM6-TRIM34B2RNG4 842 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 FGRP09769 529 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 VCAM1P19320 739 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 OSBPP22059 807 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 FAM110CQ1W6H9 321 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 AMOTL1Q8IY63 956 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 ARMC5Q96C12 935 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 TXNRD2Q9NNW7 524 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 ANAPC4Q9UJX5 808 aa19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
SCAMP4-205ENST00000452128 CCDC85CA6NKD9 419 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 APPP05067 770 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 TDO2P48775 406 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 HERVK_113P62684 666 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 ARHGEF6Q15052 776 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 TTC22Q5TAA0 569 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 LBX2Q6XYB7 198 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 ANKRD13CQ8N6S4 541 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 SRRDQ9UH36 339 aa19.24■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 PEX10O60683 326 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 FGAP02671 866 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 HSPD1P10809 573 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 PRMT2P55345 433 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 PPARAQ07869 468 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 Q3C1V9 767 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 SMCR8Q8TEV9 937 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 NAPBQ9H115 298 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 PTCH2Q9Y6C5 1203 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 ZSWIM8A7E2V4 1837 aa19.23■□□□□ 0.67
SCAMP4-205ENST00000452128 CNMDO75829 334 aa19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 EEF2P13639 858 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 ICA1Q05084 483 aa19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 KIF22Q14807 665 aa19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 ZYXQ15942 572 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 IL25Q9H293 177 aa19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 INCENPQ9NQS7 918 aa19.22■□□□□ 0.67
SCAMP4-205ENST00000452128 GREB1LQ9C091 1923 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 PRDM1O75626 825 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 IRX3P78415 501 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 NEDD1Q8NHV4 660 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 MKL1Q969V6 931 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 FEZ1Q99689 392 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 NBPF3Q9H094 633 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 VCPKMTQ9H867 229 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 MKNK2Q9HBH9 465 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 NYAP2Q9P242 653 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 GJD2Q9UKL4 321 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 GABRQQ9UN88 632 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 ZMYM6O95789 1325 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
SCAMP4-205ENST00000452128 NOVP48745 357 aa19.2■□□□□ 0.66
SCAMP4-205ENST00000452128 FCGRTP55899 365 aa19.2■□□□□ 0.66
SCAMP4-205ENST00000452128 STK11IPQ8N1F8 1099 aa19.2■□□□□ 0.66
SCAMP4-205ENST00000452128 LPAR1Q92633 364 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms