RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ZNF467Q7Z7K2 595 aaPredicted RBP9.43□□□□□ -0.9
CNOT4-207ENST00000451834 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
CNOT4-207ENST00000451834 MKL1Q969V6 931 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 BTDP43251 543 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 MCTP1Q6DN14 999 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 KIF1BPQ96EK5 621 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 OGDHLQ9ULD0 1010 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 GOLGB1Q14789 3259 aaKnown RBP9.42□□□□□ -0.9
CNOT4-207ENST00000451834 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 GUCY1A2P33402 732 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 ALX1Q15699 326 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 MORC4Q8TE76 937 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 SOCS4Q8WXH5 440 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 GBP4Q96PP9 640 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 ZNF500O60304 480 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-207ENST00000451834 TERF1P54274 439 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 MOB2Q70IA6 237 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 GBF1Q92538 1859 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 SIP14410 1827 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 CCL15-CCL14A0A0B4J2E2 113 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 DDTLA6NHG4 134 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-207ENST00000451834 SNAP23O00161 211 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 HOXD10P28358 340 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 NFIAQ12857 509 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 CCL15Q16663 113 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 DLK2Q6UY11 383 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 REPS2Q8NFH8 660 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 OTUD5Q96G74 571 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 USP40Q9NVE5 1235 aa9.42□□□□□ -0.9
CNOT4-207ENST00000451834 RNF216Q9NWF9 866 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-207ENST00000451834 COL4A4P53420 1690 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-207ENST00000451834 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-207ENST00000451834 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 KIF20AO95235 890 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 BAG3O95817 575 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
CNOT4-207ENST00000451834 GJB1P08034 283 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 PKP1Q13835 747 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 MB21D1Q8N884 522 aa9.41□□□□□ -0.9
CNOT4-207ENST00000451834 USP17L5A8MUK1 530 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 PCP11498 1178 aaKnown RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ADD2P35612 726 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 OAZ1P54368 228 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 RRP1BQ14684 758 aaKnown RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 FAM109BQ6ICB4 259 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ADGRA1Q86SQ6 560 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ASNSP08243 561 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 FDX1P10109 184 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 USP14P54578 494 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 LPAR1Q92633 364 aa9.4□□□□□ -0.9
CNOT4-207ENST00000451834 GTPBP4Q9BZE4 634 aaKnown RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 PIH1D3Q9NQM4 214 aaKnown RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 ISY1Q9ULR0 285 aaKnown RBP9.4□□□□□ -0.9
CNOT4-207ENST00000451834 APBB1O00213 710 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 LETM1O95202 739 aaPredicted RBP9.4□□□□□ -0.91
CNOT4-207ENST00000451834 BACE1P56817 501 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 GRB14Q14449 540 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 MTERF4Q7Z6M4 381 aaKnown RBP9.4□□□□□ -0.91
CNOT4-207ENST00000451834 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 WRNIP1Q96S55 665 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 TCP11L1Q9NUJ3 509 aa9.4□□□□□ -0.91
CNOT4-207ENST00000451834 SHMT1P34896 483 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 FCGRTP55899 365 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 MAGEB6Q8N7X4 407 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 PDHXO00330 501 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 TRPA1O75762 1119 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 ZFPM1Q8IX07 1006 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 BCCIPQ9P287 314 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNOT4-207ENST00000451834 ZFYP08048 801 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-207ENST00000451834 DDIT3P35638 169 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNOT4-207ENST00000451834 CCDC158Q5M9N0 1113 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 CATSPERGQ6ZRH7 1159 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 CCDC17Q96LX7 622 aa9.39□□□□□ -0.91
CNOT4-207ENST00000451834 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-207ENST00000451834 SYCE3A1L190 88 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 SLC15A5A6NIM6 579 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 TBC1D8O95759 1140 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 MAPK4P31152 587 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 CNPY4Q8N129 248 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 WDR81Q562E7 1941 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 ERICH4A6NGS2 130 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms