RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.32
FN1-212ENST00000446046 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.32
FN1-212ENST00000446046 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 CUTAO60888 179 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 N4BP1O75113 896 aaKnown RBP13.02□□□□□ -0.33
FN1-212ENST00000446046 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 CFBP00751 764 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.33
FN1-212ENST00000446046 HSPA4P34932 840 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 DCUN1D2Q6PH85 259 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 KRT9P35527 623 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
FN1-212ENST00000446046 CHST3Q7LGC8 479 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 CDHR1Q96JP9 859 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 GTF2IP78347 998 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
FN1-212ENST00000446046 DEPTORQ8TB45 409 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
FN1-212ENST00000446046 LGSNQ5TDP6 509 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 PKD2L1Q9P0L9 805 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 NT5C2P49902 561 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 ASIC2Q16515 512 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 BBOX1O75936 387 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 NCAPH2Q6IBW4 605 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 DAAM2Q86T65 1068 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 CCDC84Q86UT8 332 aaPredicted RBP13.01□□□□□ -0.33
FN1-212ENST00000446046 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
FN1-212ENST00000446046 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 KDRP35968 1356 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 AK2P54819 239 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
FN1-212ENST00000446046 FLOT1O75955 427 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 TIMM10P62072 90 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 ZSCAN23Q3MJ62 389 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 SLC9C1Q4G0N8 1177 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
FN1-212ENST00000446046 CHMLP26374 656 aa13□□□□□ -0.33
FN1-212ENST00000446046 SARNPP82979 210 aaKnown RBP13□□□□□ -0.33
FN1-212ENST00000446046 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
FN1-212ENST00000446046 CCDC6Q16204 474 aa13□□□□□ -0.33
FN1-212ENST00000446046 TTC38Q5R3I4 469 aa13□□□□□ -0.33
FN1-212ENST00000446046 NSMFQ6X4W1 530 aa13□□□□□ -0.33
FN1-212ENST00000446046 ARFGAP2Q8N6H7 521 aa13□□□□□ -0.33
FN1-212ENST00000446046 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
FN1-212ENST00000446046 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
FN1-212ENST00000446046 DACT1Q9NYF0 836 aa13□□□□□ -0.33
FN1-212ENST00000446046 OATP04181 439 aa13□□□□□ -0.33
FN1-212ENST00000446046 POLR2MP0CAP2 368 aa13□□□□□ -0.33
FN1-212ENST00000446046 RASA3Q14644 834 aa13□□□□□ -0.33
FN1-212ENST00000446046 FAM81BQ96LP2 452 aa13□□□□□ -0.33
FN1-212ENST00000446046 PTPRKQ15262 1439 aa13□□□□□ -0.33
FN1-212ENST00000446046 INSRP06213 1382 aa13□□□□□ -0.33
FN1-212ENST00000446046 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
FN1-212ENST00000446046 TNNC2P02585 160 aa13□□□□□ -0.33
FN1-212ENST00000446046 RETREG2Q8NC44 543 aa13□□□□□ -0.33
FN1-212ENST00000446046 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
FN1-212ENST00000446046 TYRO3Q06418 890 aa13□□□□□ -0.33
FN1-212ENST00000446046 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
FN1-212ENST00000446046 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 SIK1P57059 783 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 ZNF174Q15697 407 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 A1BGP04217 495 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 IL13P35225 146 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 RTKN2Q8IZC4 609 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 MYL5Q02045 173 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 TBC1D8BQ0IIM8 1120 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 IPO11Q9UI26 975 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 SKILP12757 684 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 PTPREP23469 700 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
FN1-212ENST00000446046 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
FN1-212ENST00000446046 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms