RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CCDC152Q4G0S7 254 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 ZNF462Q96JM2 2506 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 EYSQ5T1H1 3165 aa8.46□□□□□ -1.05
BRAFP1-201ENST00000445336 MAP3K13O43283 966 aa8.46□□□□□ -1.05
BRAFP1-201ENST00000445336 GADL1Q6ZQY3 521 aa8.46□□□□□ -1.05
BRAFP1-201ENST00000445336 ARNTL2Q8WYA1 636 aa8.46□□□□□ -1.05
BRAFP1-201ENST00000445336 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.05
BRAFP1-201ENST00000445336 CD4P01730 458 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 CCT4P50991 539 aaKnown RBP8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 LIMK1P53667 647 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 LRP10Q7Z4F1 713 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 ANKRD18AQ8IVF6 992 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 CDC5LQ99459 802 aaKnown RBP8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 MXD3Q9BW11 206 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 TMEM39BQ9GZU3 492 aa8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
BRAFP1-201ENST00000445336 SRRM3A6NNA2 597 aaPredicted RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 CCNA1P78396 465 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ZNF528Q3MIS6 628 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 GPR142Q7Z601 462 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 KCNG4Q8TDN1 519 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 PICK1Q9NRD5 415 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ADAMTS20P59510 1910 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 TANC1Q9C0D5 1861 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 CACNA1HO95180 2353 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 MROH7-TTC4A0A0A0MT08 1334 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 RFXAPO00287 272 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ATP2B2Q01814 1243 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 FAM151AQ8WW52 585 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ISCA1Q9BUE6 129 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 CD207Q9UJ71 328 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 SUGT1Q9Y2Z0 365 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 SETXQ7Z333 2677 aaKnown RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 MAST4O15021 2626 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 MYH3P11055 1940 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 PTPRZ1P23471 2315 aaPredicted RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 A0A0U1RQG5 324 aaPredicted RBP8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 PTPRAP18433 802 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 HERC6Q8IVU3 1022 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 CD209Q9NNX6 404 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 SLC5A4Q9NY91 659 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 GVINP1Q7Z2Y8 2422 aa8.45□□□□□ -1.06
BRAFP1-201ENST00000445336 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 RABGGTBP53611 331 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 GRB14Q14449 540 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 ANGPT1Q15389 498 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 TRPV1Q8NER1 839 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 TPRP12270 2363 aaKnown RBP8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 VCANP13611 3396 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 SRSF1Q07955 248 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 SLC43A3Q8NBI5 491 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 SUMF1Q8NBK3 374 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 TMEM121BQ9BXQ6 578 aaPredicted RBP8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 GINM1Q9NU53 330 aa8.44□□□□□ -1.06
BRAFP1-201ENST00000445336 ZIC2O95409 532 aaPredicted RBP8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 PTPREP23469 700 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 INPP5BP32019 993 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 COASYQ13057 564 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 MAST3O60307 1309 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 EIF4E1BA6NMX2 242 aaKnown RBP8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 CTNND1O60716 968 aaKnown RBP8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 PIP4K2AP48426 406 aaPredicted RBP8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 NCOR2Q9Y618 2525 aa8.43□□□□□ -1.06
BRAFP1-201ENST00000445336 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 ARVCFO00192 962 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 KCNQ3O43525 872 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 EFCAB14O75071 495 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 KLHDC9Q8NEP7 349 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 PHF7Q9BWX1 381 aaPredicted RBP8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 STARD7Q9NQZ5 370 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 CCL14Q16627 93 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 FBXW7Q969H0 707 aa8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 ASCC2Q9H1I8 757 aaPredicted RBP8.42□□□□□ -1.06
BRAFP1-201ENST00000445336 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 AOC1P19801 751 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 ZNF200P98182 395 aaPredicted RBP8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 KRT40Q6A162 431 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 LBX2Q6XYB7 198 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 PDZD3Q86UT5 571 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 ABRAQ8N0Z2 381 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 PTPRSQ13332 1948 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 RARBP10826 455 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 ZNF804AQ7Z570 1209 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 WHAMMQ8TF30 809 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 TDRD3Q9H7E2 651 aaKnown RBP8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 MYO9BQ13459 2157 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
BRAFP1-201ENST00000445336 ZNF292O60281 2723 aa8.4□□□□□ -1.06
BRAFP1-201ENST00000445336 FAM221BA6H8Z2 402 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms