RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 C22orf34Q6ZV56 151 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 FBXO27Q8NI29 283 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 GGT7Q9UJ14 662 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 TNK2Q07912 1038 aa7.91□□□□□ -1.14
VPS50-206ENST00000443443 LMCD1Q9NZU5 365 aa7.91□□□□□ -1.14
VPS50-206ENST00000443443 REV1Q9UBZ9 1251 aa7.91□□□□□ -1.14
VPS50-206ENST00000443443 ST14Q9Y5Y6 855 aa7.91□□□□□ -1.14
VPS50-206ENST00000443443 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
VPS50-206ENST00000443443 EIF4A3P38919 411 aaKnown RBP7.9□□□□□ -1.14
VPS50-206ENST00000443443 CHMP4BP1P59074 171 aa7.9□□□□□ -1.14
VPS50-206ENST00000443443 MPP2Q14168 576 aa7.9□□□□□ -1.14
VPS50-206ENST00000443443 TMEM201Q5SNT2 666 aa7.9□□□□□ -1.14
VPS50-206ENST00000443443 FBXL19Q6PCT2 694 aa7.9□□□□□ -1.14
VPS50-206ENST00000443443 HTR3BO95264 441 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 MLECQ14165 292 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 CWF19L2Q2TBE0 894 aaKnown RBP7.89□□□□□ -1.15
VPS50-206ENST00000443443 FAM196AQ6ZSG2 479 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 HS2ST1Q7LGA3 356 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 ERMP1Q7Z2K6 904 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 PHACTR4Q8IZ21 702 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 TMEM87AQ8NBN3 555 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 DNAJB8Q8NHS0 232 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 CYB5D2Q8WUJ1 264 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 FAM168AQ92567 244 aa7.89□□□□□ -1.15
VPS50-206ENST00000443443 POLR3KQ9Y2Y1 108 aaPredicted RBP7.89□□□□□ -1.15
VPS50-206ENST00000443443 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
VPS50-206ENST00000443443 ZNF16P17020 682 aaPredicted RBP7.88□□□□□ -1.15
VPS50-206ENST00000443443 MRPL58Q14197 206 aaKnown RBP7.88□□□□□ -1.15
VPS50-206ENST00000443443 THAP5Q7Z6K1 395 aa7.88□□□□□ -1.15
VPS50-206ENST00000443443 ZNF296Q8WUU4 475 aaPredicted RBP7.88□□□□□ -1.15
VPS50-206ENST00000443443 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
VPS50-206ENST00000443443 GARTP22102 1010 aa7.87□□□□□ -1.15
VPS50-206ENST00000443443 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
VPS50-206ENST00000443443 BAHD1Q8TBE0 780 aaPredicted RBP7.87□□□□□ -1.15
VPS50-206ENST00000443443 PIWIL2Q8TC59 973 aaKnown RBP7.87□□□□□ -1.15
VPS50-206ENST00000443443 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
VPS50-206ENST00000443443 CCDC74BQ96LY2 380 aa7.87□□□□□ -1.15
VPS50-206ENST00000443443 CARMIL2Q6F5E8 1435 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 PRR36Q9H6K5 1346 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 YBX3P16989 372 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS50-206ENST00000443443 GBP1P32455 592 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 MFAP1P55081 439 aaKnown RBP7.86□□□□□ -1.15
VPS50-206ENST00000443443 CREG2Q8IUH2 290 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 SLFN12Q8IYM2 578 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 Q96M66 194 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 KIF2CQ99661 725 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 TRIT1Q9H3H1 467 aaKnown RBP7.86□□□□□ -1.15
VPS50-206ENST00000443443 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 GPATCH2Q9NW75 528 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 PCDHB14Q9Y5E9 798 aa7.86□□□□□ -1.15
VPS50-206ENST00000443443 ROBO2Q9HCK4 1378 aa7.85□□□□□ -1.15
VPS50-206ENST00000443443 WASH4PA8MWX3 477 aa7.85□□□□□ -1.15
VPS50-206ENST00000443443 LRRN2O75325 713 aa7.85□□□□□ -1.15
VPS50-206ENST00000443443 TPP2P29144 1249 aaPredicted RBP7.85□□□□□ -1.15
VPS50-206ENST00000443443 MCM4P33991 863 aa7.85□□□□□ -1.15
VPS50-206ENST00000443443 AFMP43652 599 aa7.85□□□□□ -1.15
VPS50-206ENST00000443443 GREM1O60565 184 aa7.84□□□□□ -1.15
VPS50-206ENST00000443443 KCNMB1Q16558 191 aa7.84□□□□□ -1.15
VPS50-206ENST00000443443 SEZ6Q53EL9 994 aa7.84□□□□□ -1.15
VPS50-206ENST00000443443 FLAD1Q8NFF5 587 aa7.84□□□□□ -1.15
VPS50-206ENST00000443443 DUSP15Q9H1R2 295 aaPredicted RBP7.84□□□□□ -1.15
VPS50-206ENST00000443443 SLAMF8Q9P0V8 285 aa7.84□□□□□ -1.15
VPS50-206ENST00000443443 RAG1P15918 1043 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 APOBRQ0VD83 1088 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 ARSHQ5FYA8 562 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 TMPRSS7Q7RTY8 843 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 ZSWIM9Q86XI8 627 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 DTWD2Q8NBA8 298 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 RNF141Q8WVD5 230 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 TMEM40Q8WWA1 233 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 CCDC120Q96HB5 630 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 KREMEN1Q96MU8 473 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 ALPK1Q96QP1 1244 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 UBP1Q9NZI7 540 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 ADAMTS1Q9UHI8 967 aa7.83□□□□□ -1.16
VPS50-206ENST00000443443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.83□□□□□ -1.16
VPS50-206ENST00000443443 SLC22A31A6NKX4 558 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 DNAJA2O60884 412 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 GDNFP39905 211 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 FYB2Q5VWT5 728 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 GK5Q6ZS86 529 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 TTC6Q86TZ1 520 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 BACH2Q9BYV9 841 aa7.82□□□□□ -1.16
VPS50-206ENST00000443443 ESR1P03372 595 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 CRKP46108 304 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 CLEC16AQ2KHT3 1053 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 KIRREL1Q96J84 757 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 DUSP13Q9UII6 198 aa7.81□□□□□ -1.16
VPS50-206ENST00000443443 DNAJC25-GNG10A0A024R161 153 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 LRRC10BA6NIK2 292 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 LTKP29376 864 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 ZNF76P36508 570 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 HK2P52789 917 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
VPS50-206ENST00000443443 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
VPS50-206ENST00000443443 POU5F2Q8N7G0 328 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms