RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LY9Q9HBG7 655 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 NCOA5Q9HCD5 579 aaKnown RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 POLR3EQ9NVU0 708 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 RAI14Q9P0K7 980 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 ORC3Q9UBD5 711 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 ARPP21Q9UBL0 812 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-209ENST00000440653 STXBP5LQ9Y2K9 1186 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 LEMD3Q9Y2U8 911 aa10.61□□□□□ -0.71
HDAC6-209ENST00000440653 B4E1Z4 1266 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 MYCP01106 439 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 SLC3A2P08195 630 aaKnown RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 HIBADHP31937 336 aaKnown RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 PPARAQ07869 468 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 TRIM29Q14134 588 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 NFXL1Q6ZNB6 911 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 DCPSQ96C86 337 aaKnown RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 FUCA2Q9BTY2 467 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
HDAC6-209ENST00000440653 TNMDQ9H2S6 317 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 CCDC39Q9UFE4 941 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 SLC12A7Q9Y666 1083 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 ROBO3Q96MS0 1386 aa10.6□□□□□ -0.71
HDAC6-209ENST00000440653 A0A1W2PQ27 194 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 A0A1W2PQ64 194 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 A0A1W2PQD8 194 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 YDJCA8MPS7 323 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 ESPNB1AK53 854 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 UBE2Q2LH0YL09 131 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 IFIT3O14879 490 aaKnown RBP10.59□□□□□ -0.71
HDAC6-209ENST00000440653 CLCN1P35523 988 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 GYG1P46976 350 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 GSTO1P78417 241 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 WTAPQ15007 396 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 CRY2Q49AN0 593 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 ZNF804AQ7Z570 1209 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 ZSCAN30Q86W11 494 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 MICU3Q86XE3 530 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 TRIM22Q8IYM9 498 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 WDR66Q8TBY9 1149 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 ZNF333Q96JL9 665 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 FAM84BQ96KN1 310 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-209ENST00000440653 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 ABCF2Q9UG63 623 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 RCOR1Q9UKL0 485 aa10.59□□□□□ -0.71
HDAC6-209ENST00000440653 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.71
HDAC6-209ENST00000440653 EYSQ5T1H1 3165 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 KINO60870 393 aaKnown RBP10.58□□□□□ -0.72
HDAC6-209ENST00000440653 KDM4AO75164 1064 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 CALM1P0DP23 149 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 CALM2P0DP24 149 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 CALM3P0DP25 149 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 FDPSP14324 419 aaKnown RBP10.58□□□□□ -0.72
HDAC6-209ENST00000440653 IFNAR1P17181 557 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 FAM160A1Q05DH4 1040 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 TNIP1Q15025 636 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 MYSM1Q5VVJ2 828 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 FAM200AQ8TCP9 573 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 IGDCC4Q8TDY8 1250 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 RPGRQ92834 1020 aaKnown RBP10.58□□□□□ -0.72
HDAC6-209ENST00000440653 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 MYH8P13535 1937 aa10.58□□□□□ -0.72
HDAC6-209ENST00000440653 SNAP23O00161 211 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 ORC4O43929 436 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 DDAH1O94760 285 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 FMNL1O95466 1100 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 FGRP09769 529 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 RTN1Q16799 776 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 SLC4A8Q2Y0W8 1093 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 IQCA1Q86XH1 822 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 MIGA1Q8NAN2 632 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 MRPS27Q92552 414 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 NOL10Q9BSC4 688 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 ALG1Q9BT22 464 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 RBM28Q9NW13 759 aaKnown RBP10.57□□□□□ -0.72
HDAC6-209ENST00000440653 DACT1Q9NYF0 836 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
HDAC6-209ENST00000440653 DEXIO95424 95 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 XBP1P17861 261 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 LIG1P18858 919 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 ATP2B4P23634 1241 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 TYRO3Q06418 890 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 SSRP1Q08945 709 aaKnown RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 STK38Q15208 465 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms